Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Mmel1-201ENSMUST00000079269 2934 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Lsm3P62311 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Ccnc-201ENSMUST00000065928 3484 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Lrrcc1-202ENSMUST00000108370 3359 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.67□□□□□ -0.86
Lsm3P62311 Myrf-205ENSMUST00000189897 3339 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Lsm3P62311 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Lsm3P62311 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC9.67□□□□□ -0.86
Lsm3P62311 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Lsm3P62311 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Mrpl32-202ENSMUST00000220621 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.67□□□□□ -0.86
Lsm3P62311 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC9.67□□□□□ -0.86
Lsm3P62311 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Sec31b-202ENSMUST00000111985 3548 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Mrpl47-201ENSMUST00000043966 3364 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
Lsm3P62311 Ncaph2-203ENSMUST00000088717 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Gm5525-201ENSMUST00000190438 1312 ntBASIC9.67□□□□□ -0.86
Lsm3P62311 Mfsd2b-204ENSMUST00000137337 2641 ntTSL 2 BASIC9.67□□□□□ -0.86
Lsm3P62311 Iqgap3-204ENSMUST00000194440 3263 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Lsm3P62311 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Gm15370-201ENSMUST00000117158 253 ntBASIC9.67□□□□□ -0.86
Lsm3P62311 Gm14109-201ENSMUST00000118814 309 ntBASIC9.67□□□□□ -0.86
Lsm3P62311 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC9.67□□□□□ -0.86
Lsm3P62311 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Lsm3P62311 Gm5714-201ENSMUST00000197343 566 ntBASIC9.67□□□□□ -0.86
Lsm3P62311 Gm5865-201ENSMUST00000198713 637 ntBASIC9.67□□□□□ -0.86
Lsm3P62311 Gm7504-201ENSMUST00000201449 424 ntBASIC9.67□□□□□ -0.86
Lsm3P62311 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.67□□□□□ -0.86
Lsm3P62311 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.67□□□□□ -0.86
Lsm3P62311 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC9.67□□□□□ -0.86
Lsm3P62311 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Lsm3P62311 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Pear1-216ENSMUST00000174759 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Rab44-201ENSMUST00000087942 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Phf8-206ENSMUST00000112670 3484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC9.67□□□□□ -0.86
Lsm3P62311 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Lsm3P62311 Gm37909-201ENSMUST00000193157 2159 ntBASIC9.67□□□□□ -0.86
Lsm3P62311 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Lsm3P62311 Ephb4-205ENSMUST00000166239 3741 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Lsm3P62311 Gm44741-201ENSMUST00000207503 2127 ntBASIC9.67□□□□□ -0.86
Lsm3P62311 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm3P62311 Amotl1-206ENSMUST00000223132 3046 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Lsm3P62311 Ccdc40-202ENSMUST00000053440 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Atxn1-203ENSMUST00000180110 3901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Wnk4-201ENSMUST00000103108 4117 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 P2ry14-202ENSMUST00000091112 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 CT572985.1-201ENSMUST00000220599 4714 ntBASIC9.66□□□□□ -0.86
Lsm3P62311 Pear1-202ENSMUST00000079083 4297 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Lsm3P62311 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Gtpbp10-202ENSMUST00000115441 2972 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Gm11801-201ENSMUST00000117807 746 ntBASIC9.66□□□□□ -0.86
Lsm3P62311 Gm11663-201ENSMUST00000117888 290 ntBASIC9.66□□□□□ -0.86
Lsm3P62311 Gm14660-201ENSMUST00000119809 575 ntBASIC9.66□□□□□ -0.86
Lsm3P62311 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Gm29543-201ENSMUST00000188138 967 ntBASIC9.66□□□□□ -0.86
Lsm3P62311 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC9.66□□□□□ -0.86
Lsm3P62311 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC9.66□□□□□ -0.86
Lsm3P62311 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.66□□□□□ -0.86
Lsm3P62311 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC9.66□□□□□ -0.86
Lsm3P62311 Gm6867-201ENSMUST00000219165 425 ntBASIC9.66□□□□□ -0.86
Lsm3P62311 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC9.66□□□□□ -0.86
Lsm3P62311 AC158982.1-201ENSMUST00000228377 901 ntBASIC9.66□□□□□ -0.86
Lsm3P62311 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Lsm3P62311 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Lsm3P62311 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Lsm3P62311 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Lsm3P62311 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC9.66□□□□□ -0.86
Lsm3P62311 Smim1-202ENSMUST00000126119 3996 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Lsm3P62311 Gfm2-208ENSMUST00000161639 3157 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Slco5a1-204ENSMUST00000136197 5123 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Col10a1-201ENSMUST00000105511 3130 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Lsm3P62311 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms