Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Pdx1P52946 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.64□□□□□ -0.71
Pdx1P52946 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Pdx1P52946 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Pdx1P52946 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Pdx1P52946 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.64□□□□□ -0.71
Pdx1P52946 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC10.63□□□□□ -0.71
Pdx1P52946 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Pdx1P52946 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.63□□□□□ -0.71
Pdx1P52946 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Pdx1P52946 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Pdx1P52946 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC10.63□□□□□ -0.71
Pdx1P52946 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Pdx1P52946 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.63□□□□□ -0.71
Pdx1P52946 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.63□□□□□ -0.71
Pdx1P52946 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.63□□□□□ -0.71
Pdx1P52946 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Pdx1P52946 Gm23061-201ENSMUST00000102348 116 ntBASIC10.63□□□□□ -0.71
Pdx1P52946 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
Pdx1P52946 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.63□□□□□ -0.71
Pdx1P52946 Gm6158-201ENSMUST00000109467 904 ntBASIC10.63□□□□□ -0.71
Pdx1P52946 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.63□□□□□ -0.71
Pdx1P52946 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.63□□□□□ -0.71
Pdx1P52946 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC10.63□□□□□ -0.71
Pdx1P52946 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC10.63□□□□□ -0.71
Pdx1P52946 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.63□□□□□ -0.71
Pdx1P52946 Gm37597-201ENSMUST00000191853 382 ntBASIC10.63□□□□□ -0.71
Pdx1P52946 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC10.63□□□□□ -0.71
Pdx1P52946 Gm18466-201ENSMUST00000209147 499 ntBASIC10.63□□□□□ -0.71
Pdx1P52946 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.63□□□□□ -0.71
Pdx1P52946 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 AC140293.1-201ENSMUST00000225626 1247 ntBASIC10.63□□□□□ -0.71
Pdx1P52946 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Gm7536-201ENSMUST00000077389 444 ntBASIC10.63□□□□□ -0.71
Pdx1P52946 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Pdx1P52946 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Pdx1P52946 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Gm8684-201ENSMUST00000195078 1564 ntBASIC10.63□□□□□ -0.71
Pdx1P52946 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.63□□□□□ -0.71
Pdx1P52946 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Pdx1P52946 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Pdx1P52946 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pdx1P52946 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.62□□□□□ -0.71
Pdx1P52946 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.62□□□□□ -0.71
Pdx1P52946 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Pdx1P52946 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.62□□□□□ -0.71
Pdx1P52946 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.62□□□□□ -0.71
Pdx1P52946 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.62□□□□□ -0.71
Pdx1P52946 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.62□□□□□ -0.71
Pdx1P52946 Gm42521-201ENSMUST00000199190 2040 ntBASIC10.62□□□□□ -0.71
Pdx1P52946 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Pdx1P52946 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Pdx1P52946 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC10.62□□□□□ -0.71
Pdx1P52946 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC10.62□□□□□ -0.71
Pdx1P52946 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms