Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClgnP52194 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
ClgnP52194 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC11.04□□□□□ -0.64
ClgnP52194 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
ClgnP52194 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
ClgnP52194 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Prr30-201ENSMUST00000057718 1862 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
ClgnP52194 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
ClgnP52194 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC11.04□□□□□ -0.64
ClgnP52194 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
ClgnP52194 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
ClgnP52194 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.04□□□□□ -0.64
ClgnP52194 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Gm27910-201ENSMUST00000185004 107 ntBASIC11.04□□□□□ -0.64
ClgnP52194 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Gm8197-202ENSMUST00000193422 934 ntBASIC11.04□□□□□ -0.64
ClgnP52194 Gm37826-201ENSMUST00000195329 322 ntBASIC11.04□□□□□ -0.64
ClgnP52194 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
ClgnP52194 Gm9463-201ENSMUST00000206707 601 ntBASIC11.04□□□□□ -0.64
ClgnP52194 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.04□□□□□ -0.64
ClgnP52194 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.04□□□□□ -0.64
ClgnP52194 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.04□□□□□ -0.64
ClgnP52194 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
ClgnP52194 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.04□□□□□ -0.64
ClgnP52194 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
ClgnP52194 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.04□□□□□ -0.64
ClgnP52194 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC11.04□□□□□ -0.64
ClgnP52194 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.04□□□□□ -0.64
ClgnP52194 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.04□□□□□ -0.64
ClgnP52194 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.04□□□□□ -0.64
ClgnP52194 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
ClgnP52194 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
ClgnP52194 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.04□□□□□ -0.64
ClgnP52194 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClgnP52194 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.03□□□□□ -0.64
ClgnP52194 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClgnP52194 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClgnP52194 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
ClgnP52194 AC165148.1-201ENSMUST00000224795 2372 ntBASIC11.03□□□□□ -0.64
ClgnP52194 Gm9271-201ENSMUST00000185988 2580 ntBASIC11.03□□□□□ -0.64
ClgnP52194 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
ClgnP52194 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClgnP52194 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
ClgnP52194 Gm16166-201ENSMUST00000118291 787 ntBASIC11.03□□□□□ -0.64
ClgnP52194 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.03□□□□□ -0.64
ClgnP52194 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.03□□□□□ -0.64
ClgnP52194 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.03□□□□□ -0.64
ClgnP52194 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.03□□□□□ -0.64
ClgnP52194 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.03□□□□□ -0.64
ClgnP52194 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.03□□□□□ -0.64
ClgnP52194 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClgnP52194 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
ClgnP52194 Mir7076-201ENSMUST00000183519 74 ntBASIC11.03□□□□□ -0.64
ClgnP52194 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.03□□□□□ -0.64
ClgnP52194 Gm18827-201ENSMUST00000188341 790 ntBASIC11.03□□□□□ -0.64
ClgnP52194 Gm37301-201ENSMUST00000195412 568 ntBASIC11.03□□□□□ -0.64
ClgnP52194 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.03□□□□□ -0.64
ClgnP52194 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.03□□□□□ -0.64
ClgnP52194 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.03□□□□□ -0.64
ClgnP52194 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.03□□□□□ -0.64
ClgnP52194 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.03□□□□□ -0.64
ClgnP52194 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClgnP52194 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
ClgnP52194 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
ClgnP52194 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
ClgnP52194 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClgnP52194 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClgnP52194 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
ClgnP52194 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
ClgnP52194 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms