Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.96□□□□□ -0.65
SftpbP50405 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.96□□□□□ -0.65
SftpbP50405 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.96□□□□□ -0.65
SftpbP50405 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SftpbP50405 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SftpbP50405 Gm25580-201ENSMUST00000083409 327 ntBASIC10.96□□□□□ -0.65
SftpbP50405 Gm10263-201ENSMUST00000085163 300 ntBASIC10.96□□□□□ -0.65
SftpbP50405 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SftpbP50405 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SftpbP50405 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SftpbP50405 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
SftpbP50405 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.96□□□□□ -0.66
SftpbP50405 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC10.96□□□□□ -0.66
SftpbP50405 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SftpbP50405 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SftpbP50405 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SftpbP50405 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SftpbP50405 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
SftpbP50405 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SftpbP50405 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SftpbP50405 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SftpbP50405 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.95□□□□□ -0.66
SftpbP50405 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
SftpbP50405 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
SftpbP50405 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.95□□□□□ -0.66
SftpbP50405 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.95□□□□□ -0.66
SftpbP50405 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Gm14942-201ENSMUST00000119642 336 ntBASIC10.95□□□□□ -0.66
SftpbP50405 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.95□□□□□ -0.66
SftpbP50405 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Gm6485-201ENSMUST00000160676 439 ntBASIC10.95□□□□□ -0.66
SftpbP50405 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
SftpbP50405 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.95□□□□□ -0.66
SftpbP50405 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.95□□□□□ -0.66
SftpbP50405 Gm37458-201ENSMUST00000194055 410 ntBASIC10.95□□□□□ -0.66
SftpbP50405 Gm9132-201ENSMUST00000210182 832 ntBASIC10.95□□□□□ -0.66
SftpbP50405 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.95□□□□□ -0.66
SftpbP50405 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.95□□□□□ -0.66
SftpbP50405 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.95□□□□□ -0.66
SftpbP50405 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.95□□□□□ -0.66
SftpbP50405 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.95□□□□□ -0.66
SftpbP50405 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
SftpbP50405 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC10.95□□□□□ -0.66
SftpbP50405 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.95□□□□□ -0.66
SftpbP50405 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SftpbP50405 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC10.95□□□□□ -0.66
SftpbP50405 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC10.95□□□□□ -0.66
SftpbP50405 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SftpbP50405 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SftpbP50405 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.94□□□□□ -0.66
SftpbP50405 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SftpbP50405 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SftpbP50405 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SftpbP50405 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SftpbP50405 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SftpbP50405 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SftpbP50405 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.94□□□□□ -0.66
SftpbP50405 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SftpbP50405 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SftpbP50405 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SftpbP50405 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SftpbP50405 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SftpbP50405 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SftpbP50405 Gm12337-201ENSMUST00000119634 400 ntBASIC10.94□□□□□ -0.66
SftpbP50405 Gm14585-201ENSMUST00000120713 634 ntBASIC10.94□□□□□ -0.66
SftpbP50405 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SftpbP50405 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC10.94□□□□□ -0.66
SftpbP50405 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.94□□□□□ -0.66
SftpbP50405 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.94□□□□□ -0.66
SftpbP50405 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.94□□□□□ -0.66
SftpbP50405 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.94□□□□□ -0.66
SftpbP50405 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.94□□□□□ -0.66
SftpbP50405 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.94□□□□□ -0.66
SftpbP50405 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.94□□□□□ -0.66
SftpbP50405 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.94□□□□□ -0.66
SftpbP50405 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.94□□□□□ -0.66
SftpbP50405 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.94□□□□□ -0.66
SftpbP50405 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.94□□□□□ -0.66
SftpbP50405 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SftpbP50405 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SftpbP50405 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms