Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm9644-201ENSMUST00000212828 1183 ntBASIC12.97□□□□□ -0.33
LtbrP50284 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC12.97□□□□□ -0.33
LtbrP50284 AC159297.2-201ENSMUST00000219567 1075 ntBASIC12.97□□□□□ -0.33
LtbrP50284 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC12.97□□□□□ -0.33
LtbrP50284 AC154643.1-201ENSMUST00000225643 625 ntBASIC12.97□□□□□ -0.33
LtbrP50284 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LtbrP50284 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC12.97□□□□□ -0.33
LtbrP50284 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC12.97□□□□□ -0.33
LtbrP50284 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LtbrP50284 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LtbrP50284 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LtbrP50284 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LtbrP50284 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LtbrP50284 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.97□□□□□ -0.33
LtbrP50284 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LtbrP50284 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC12.97□□□□□ -0.33
LtbrP50284 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LtbrP50284 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LtbrP50284 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LtbrP50284 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.97□□□□□ -0.33
LtbrP50284 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LtbrP50284 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LtbrP50284 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LtbrP50284 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LtbrP50284 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LtbrP50284 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LtbrP50284 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LtbrP50284 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.96□□□□□ -0.33
LtbrP50284 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.96□□□□□ -0.33
LtbrP50284 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.96□□□□□ -0.33
LtbrP50284 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
LtbrP50284 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Gm14481-201ENSMUST00000117178 629 ntBASIC12.96□□□□□ -0.33
LtbrP50284 Gm14071-201ENSMUST00000117817 509 ntBASIC12.96□□□□□ -0.33
LtbrP50284 Gm3828-201ENSMUST00000121817 257 ntBASIC12.96□□□□□ -0.33
LtbrP50284 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.96□□□□□ -0.33
LtbrP50284 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.96□□□□□ -0.33
LtbrP50284 Gm18733-202ENSMUST00000174447 401 ntBASIC12.96□□□□□ -0.33
LtbrP50284 Gm5808-201ENSMUST00000178090 357 ntBASIC12.96□□□□□ -0.33
LtbrP50284 Gm38283-201ENSMUST00000193041 695 ntBASIC12.96□□□□□ -0.33
LtbrP50284 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC12.96□□□□□ -0.33
LtbrP50284 Gm43894-201ENSMUST00000203274 688 ntBASIC12.96□□□□□ -0.33
LtbrP50284 AC241616.1-201ENSMUST00000213741 166 ntBASIC12.96□□□□□ -0.33
LtbrP50284 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Gm18065-201ENSMUST00000221395 526 ntBASIC12.96□□□□□ -0.33
LtbrP50284 AC133517.2-201ENSMUST00000226820 690 ntBASIC12.96□□□□□ -0.33
LtbrP50284 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
LtbrP50284 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LtbrP50284 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.96□□□□□ -0.34
LtbrP50284 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.96□□□□□ -0.34
LtbrP50284 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LtbrP50284 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
LtbrP50284 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LtbrP50284 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LtbrP50284 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LtbrP50284 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
LtbrP50284 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LtbrP50284 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LtbrP50284 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.96□□□□□ -0.34
LtbrP50284 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LtbrP50284 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LtbrP50284 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LtbrP50284 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LtbrP50284 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LtbrP50284 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LtbrP50284 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.95□□□□□ -0.34
LtbrP50284 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.95□□□□□ -0.34
LtbrP50284 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LtbrP50284 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.95□□□□□ -0.34
LtbrP50284 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC12.95□□□□□ -0.34
LtbrP50284 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LtbrP50284 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms