Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.47□□□□□ -0.73
Rph3aP47708 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
Rph3aP47708 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Rph3aP47708 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Rph3aP47708 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.47□□□□□ -0.73
Rph3aP47708 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.47□□□□□ -0.73
Rph3aP47708 Gm13117-201ENSMUST00000120894 691 ntBASIC10.47□□□□□ -0.73
Rph3aP47708 Gm3828-201ENSMUST00000121817 257 ntBASIC10.47□□□□□ -0.73
Rph3aP47708 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.47□□□□□ -0.73
Rph3aP47708 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.47□□□□□ -0.73
Rph3aP47708 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.47□□□□□ -0.73
Rph3aP47708 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC10.47□□□□□ -0.73
Rph3aP47708 Gm45594-201ENSMUST00000211717 241 ntBASIC10.47□□□□□ -0.73
Rph3aP47708 Gm18042-201ENSMUST00000219887 790 ntBASIC10.47□□□□□ -0.73
Rph3aP47708 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Rph3aP47708 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Rph3aP47708 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Rph3aP47708 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.47□□□□□ -0.73
Rph3aP47708 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.47□□□□□ -0.73
Rph3aP47708 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.47□□□□□ -0.73
Rph3aP47708 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Rph3aP47708 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.47□□□□□ -0.73
Rph3aP47708 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rph3aP47708 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.47□□□□□ -0.73
Rph3aP47708 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Rph3aP47708 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rph3aP47708 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rph3aP47708 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rph3aP47708 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.46□□□□□ -0.73
Rph3aP47708 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Rph3aP47708 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rph3aP47708 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Rph3aP47708 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rph3aP47708 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Rph3aP47708 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.46□□□□□ -0.73
Rph3aP47708 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.46□□□□□ -0.73
Rph3aP47708 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.46□□□□□ -0.73
Rph3aP47708 Gm12136-201ENSMUST00000120460 1209 ntBASIC10.46□□□□□ -0.73
Rph3aP47708 Gm12899-201ENSMUST00000120565 551 ntBASIC10.46□□□□□ -0.73
Rph3aP47708 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC10.46□□□□□ -0.73
Rph3aP47708 Gm10169-201ENSMUST00000121822 348 ntBASIC10.46□□□□□ -0.73
Rph3aP47708 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.46□□□□□ -0.73
Rph3aP47708 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.46□□□□□ -0.73
Rph3aP47708 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.46□□□□□ -0.73
Rph3aP47708 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Rph3aP47708 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.46□□□□□ -0.73
Rph3aP47708 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rph3aP47708 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rph3aP47708 Gm7255-201ENSMUST00000187371 908 ntBASIC10.46□□□□□ -0.73
Rph3aP47708 Gm42518-201ENSMUST00000196277 938 ntBASIC10.46□□□□□ -0.73
Rph3aP47708 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rph3aP47708 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.46□□□□□ -0.73
Rph3aP47708 Gm19009-201ENSMUST00000223072 823 ntBASIC10.46□□□□□ -0.73
Rph3aP47708 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Rph3aP47708 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rph3aP47708 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Rph3aP47708 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rph3aP47708 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rph3aP47708 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rph3aP47708 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rph3aP47708 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rph3aP47708 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rph3aP47708 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rph3aP47708 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rph3aP47708 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rph3aP47708 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rph3aP47708 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Rph3aP47708 Gm37962-201ENSMUST00000195535 2034 ntBASIC10.46□□□□□ -0.74
Rph3aP47708 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC10.46□□□□□ -0.74
Rph3aP47708 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rph3aP47708 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rph3aP47708 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Rph3aP47708 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rph3aP47708 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms