Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vcam1P29533 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vcam1P29533 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Vcam1P29533 Gm45663-201ENSMUST00000210429 1632 ntBASIC12.34□□□□□ -0.43
Vcam1P29533 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 Gm22751-201ENSMUST00000102077 109 ntBASIC12.34□□□□□ -0.43
Vcam1P29533 Mir692-3-201ENSMUST00000102079 109 ntBASIC12.34□□□□□ -0.43
Vcam1P29533 Mir692-2-201ENSMUST00000102081 109 ntBASIC12.34□□□□□ -0.43
Vcam1P29533 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Vcam1P29533 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 Gm14176-201ENSMUST00000121302 477 ntBASIC12.34□□□□□ -0.43
Vcam1P29533 Gm12009-201ENSMUST00000121361 1100 ntBASIC12.34□□□□□ -0.43
Vcam1P29533 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vcam1P29533 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC12.34□□□□□ -0.43
Vcam1P29533 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC12.34□□□□□ -0.43
Vcam1P29533 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 Gm38321-201ENSMUST00000195053 235 ntBASIC12.34□□□□□ -0.43
Vcam1P29533 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC12.34□□□□□ -0.43
Vcam1P29533 Gm5881-201ENSMUST00000204737 367 ntBASIC12.34□□□□□ -0.43
Vcam1P29533 Gm7319-201ENSMUST00000210047 778 ntBASIC12.34□□□□□ -0.43
Vcam1P29533 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 AC157650.1-201ENSMUST00000224582 610 ntBASIC12.34□□□□□ -0.43
Vcam1P29533 Gm5424-201ENSMUST00000053865 1240 ntBASIC12.34□□□□□ -0.43
Vcam1P29533 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC12.34□□□□□ -0.43
Vcam1P29533 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC12.34□□□□□ -0.43
Vcam1P29533 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Vcam1P29533 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Vcam1P29533 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Vcam1P29533 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12.34□□□□□ -0.43
Vcam1P29533 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vcam1P29533 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vcam1P29533 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC12.34□□□□□ -0.43
Vcam1P29533 AC159810.1-201ENSMUST00000214838 1480 ntBASIC12.34□□□□□ -0.43
Vcam1P29533 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Vcam1P29533 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Vcam1P29533 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Vcam1P29533 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Vcam1P29533 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Gm45170-201ENSMUST00000206746 1671 ntBASIC12.33□□□□□ -0.44
Vcam1P29533 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Gm24470-201ENSMUST00000104486 132 ntBASIC12.33□□□□□ -0.44
Vcam1P29533 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Vcam1P29533 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC12.33□□□□□ -0.44
Vcam1P29533 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC12.33□□□□□ -0.44
Vcam1P29533 Gm20091-201ENSMUST00000179683 189 ntBASIC12.33□□□□□ -0.44
Vcam1P29533 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Gm30055-201ENSMUST00000203175 803 ntBASIC12.33□□□□□ -0.44
Vcam1P29533 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Vcam1P29533 Gm6426-201ENSMUST00000209048 854 ntBASIC12.33□□□□□ -0.44
Vcam1P29533 AC125409.3-201ENSMUST00000223488 653 ntBASIC12.33□□□□□ -0.44
Vcam1P29533 AC149294.3-201ENSMUST00000226888 732 ntBASIC12.33□□□□□ -0.44
Vcam1P29533 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.33□□□□□ -0.44
Vcam1P29533 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Vcam1P29533 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Vcam1P29533 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Vcam1P29533 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Vcam1P29533 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vcam1P29533 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vcam1P29533 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12.32□□□□□ -0.44
Vcam1P29533 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vcam1P29533 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC12.32□□□□□ -0.44
Vcam1P29533 Gm44975-201ENSMUST00000207435 1390 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms