Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm3791-201ENSMUST00000220790 768 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 AC157650.1-201ENSMUST00000224582 610 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC8.98□□□□□ -0.97
Col8a2P25318 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 AC153506.1-201ENSMUST00000218768 2915 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC8.98□□□□□ -0.97
Col8a2P25318 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Col8a2P25318 Gm7405-201ENSMUST00000121476 1337 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Col8a2P25318 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Col8a2P25318 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Col8a2P25318 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Gm12912-201ENSMUST00000121596 1381 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Col8a2P25318 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Gm45165-201ENSMUST00000207763 1631 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Col8a2P25318 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 AC151836.1-201ENSMUST00000228730 1637 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Col8a2P25318 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Col8a2P25318 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 AC022682.1-201ENSMUST00000224624 2023 ntBASIC8.97□□□□□ -0.97
Col8a2P25318 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
Col8a2P25318 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Col8a2P25318 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Gm22937-201ENSMUST00000103954 131 ntBASIC8.97□□□□□ -0.97
Col8a2P25318 Gm14993-201ENSMUST00000121180 164 ntBASIC8.97□□□□□ -0.97
Col8a2P25318 Gm15031-201ENSMUST00000121341 210 ntBASIC8.97□□□□□ -0.97
Col8a2P25318 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC8.97□□□□□ -0.97
Col8a2P25318 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC8.97□□□□□ -0.97
Col8a2P25318 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC8.97□□□□□ -0.97
Col8a2P25318 Gm25569-201ENSMUST00000157175 131 ntBASIC8.97□□□□□ -0.97
Col8a2P25318 Gm24346-201ENSMUST00000158712 194 ntBASIC8.97□□□□□ -0.97
Col8a2P25318 Gm22876-201ENSMUST00000175450 298 ntBASIC8.97□□□□□ -0.97
Col8a2P25318 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Col8a2P25318 Gm45085-201ENSMUST00000209100 441 ntBASIC8.97□□□□□ -0.97
Col8a2P25318 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC8.97□□□□□ -0.97
Col8a2P25318 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Col8a2P25318 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC8.97□□□□□ -0.97
Col8a2P25318 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC8.97□□□□□ -0.97
Col8a2P25318 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC8.97□□□□□ -0.97
Col8a2P25318 Gm10110-202ENSMUST00000228705 3220 ntBASIC8.97□□□□□ -0.97
Col8a2P25318 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col8a2P25318 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Col8a2P25318 Gm42521-201ENSMUST00000199190 2040 ntBASIC8.97□□□□□ -0.97
Col8a2P25318 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Col8a2P25318 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col8a2P25318 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col8a2P25318 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col8a2P25318 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col8a2P25318 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col8a2P25318 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col8a2P25318 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Col8a2P25318 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col8a2P25318 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col8a2P25318 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col8a2P25318 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col8a2P25318 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col8a2P25318 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Col8a2P25318 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col8a2P25318 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col8a2P25318 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Col8a2P25318 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC8.96□□□□□ -0.97
Col8a2P25318 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col8a2P25318 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Col8a2P25318 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms