Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxd8P23463 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxd8P23463 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxd8P23463 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxd8P23463 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxd8P23463 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxd8P23463 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxd8P23463 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxd8P23463 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.27□□□□□ -0.6
Hoxd8P23463 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxd8P23463 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Hoxd8P23463 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxd8P23463 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxd8P23463 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxd8P23463 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hoxd8P23463 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Gm15225-201ENSMUST00000120449 1017 ntBASIC11.27□□□□□ -0.61
Hoxd8P23463 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.27□□□□□ -0.61
Hoxd8P23463 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC11.27□□□□□ -0.61
Hoxd8P23463 Mir1941-201ENSMUST00000157834 83 ntBASIC11.27□□□□□ -0.61
Hoxd8P23463 Gm24078-201ENSMUST00000158184 103 ntBASIC11.27□□□□□ -0.61
Hoxd8P23463 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC11.27□□□□□ -0.61
Hoxd8P23463 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Gm20694-201ENSMUST00000176943 404 ntBASIC11.27□□□□□ -0.61
Hoxd8P23463 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hoxd8P23463 Gm7765-201ENSMUST00000182585 974 ntBASIC11.27□□□□□ -0.61
Hoxd8P23463 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Gm28746-201ENSMUST00000187453 380 ntBASIC11.27□□□□□ -0.61
Hoxd8P23463 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Gm37688-201ENSMUST00000195195 465 ntBASIC11.27□□□□□ -0.61
Hoxd8P23463 Gm37301-201ENSMUST00000195412 568 ntBASIC11.27□□□□□ -0.61
Hoxd8P23463 Gm5650-201ENSMUST00000209641 598 ntBASIC11.27□□□□□ -0.61
Hoxd8P23463 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC11.27□□□□□ -0.61
Hoxd8P23463 AC153529.1-201ENSMUST00000217818 370 ntBASIC11.27□□□□□ -0.61
Hoxd8P23463 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Mir194-2-201ENSMUST00000083648 86 ntBASIC11.27□□□□□ -0.61
Hoxd8P23463 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC11.27□□□□□ -0.61
Hoxd8P23463 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Hoxd8P23463 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.27□□□□□ -0.61
Hoxd8P23463 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Hoxd8P23463 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxd8P23463 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC11.26□□□□□ -0.61
Hoxd8P23463 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.26□□□□□ -0.61
Hoxd8P23463 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.26□□□□□ -0.61
Hoxd8P23463 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hoxd8P23463 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Hoxd8P23463 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Gm12601-201ENSMUST00000118994 846 ntBASIC11.26□□□□□ -0.61
Hoxd8P23463 Gm11622-201ENSMUST00000120525 691 ntBASIC11.26□□□□□ -0.61
Hoxd8P23463 Gm24140-201ENSMUST00000122773 326 ntBASIC11.26□□□□□ -0.61
Hoxd8P23463 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Hoxd8P23463 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hoxd8P23463 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Hoxd8P23463 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxd8P23463 Gm5335-201ENSMUST00000182995 1000 ntBASIC11.26□□□□□ -0.61
Hoxd8P23463 Gm27441-201ENSMUST00000185000 105 ntBASIC11.26□□□□□ -0.61
Hoxd8P23463 Zcwpw2-203ENSMUST00000187803 372 ntBASIC11.26□□□□□ -0.61
Hoxd8P23463 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC11.26□□□□□ -0.61
Hoxd8P23463 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Hoxd8P23463 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.26□□□□□ -0.61
Hoxd8P23463 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC11.26□□□□□ -0.61
Hoxd8P23463 AC107752.1-201ENSMUST00000219362 469 ntBASIC11.26□□□□□ -0.61
Hoxd8P23463 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms