Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.57□□□□□ -0.88
P20040 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.57□□□□□ -0.88
P20040 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.57□□□□□ -0.88
P20040 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.57□□□□□ -0.88
P20040 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.57□□□□□ -0.88
P20040 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
P20040 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.57□□□□□ -0.88
P20040 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
P20040 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
P20040 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P20040 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
P20040 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P20040 Gm15374-201ENSMUST00000119313 844 ntBASIC9.57□□□□□ -0.88
P20040 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.57□□□□□ -0.88
P20040 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
P20040 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
P20040 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC9.57□□□□□ -0.88
P20040 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.57□□□□□ -0.88
P20040 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
P20040 Gm24398-201ENSMUST00000157870 109 ntBASIC9.57□□□□□ -0.88
P20040 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC9.57□□□□□ -0.88
P20040 Gm27441-201ENSMUST00000185000 105 ntBASIC9.57□□□□□ -0.88
P20040 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.57□□□□□ -0.88
P20040 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.57□□□□□ -0.88
P20040 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC9.57□□□□□ -0.88
P20040 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
P20040 Gm23680-201ENSMUST00000083162 164 ntBASIC9.57□□□□□ -0.88
P20040 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.57□□□□□ -0.88
P20040 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P20040 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P20040 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
P20040 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
P20040 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
P20040 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P20040 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P20040 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.57□□□□□ -0.88
P20040 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P20040 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
P20040 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P20040 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
P20040 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC9.56□□□□□ -0.88
P20040 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
P20040 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.56□□□□□ -0.88
P20040 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
P20040 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
P20040 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.56□□□□□ -0.88
P20040 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.56□□□□□ -0.88
P20040 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.56□□□□□ -0.88
P20040 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC9.56□□□□□ -0.88
P20040 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.56□□□□□ -0.88
P20040 Gm15617-201ENSMUST00000118973 771 ntBASIC9.56□□□□□ -0.88
P20040 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
P20040 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC9.56□□□□□ -0.88
P20040 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Gm21778-201ENSMUST00000178779 471 ntBASIC9.56□□□□□ -0.88
P20040 Gm42518-201ENSMUST00000196277 938 ntBASIC9.56□□□□□ -0.88
P20040 Gm42657-201ENSMUST00000201746 211 ntBASIC9.56□□□□□ -0.88
P20040 Gm5302-201ENSMUST00000202130 796 ntBASIC9.56□□□□□ -0.88
P20040 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
P20040 Gm45219-201ENSMUST00000205602 465 ntBASIC9.56□□□□□ -0.88
P20040 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.56□□□□□ -0.88
P20040 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.56□□□□□ -0.88
P20040 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
P20040 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
P20040 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.56□□□□□ -0.88
P20040 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
P20040 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
P20040 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.56□□□□□ -0.88
P20040 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
P20040 AC144938.1-201ENSMUST00000223994 2167 ntBASIC9.56□□□□□ -0.88
P20040 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
P20040 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
P20040 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P20040 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
P20040 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
P20040 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
P20040 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
P20040 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
P20040 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P20040 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms