Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm4654-201ENSMUST00000183305 982 ntBASIC9.79□□□□□ -0.84
Hmgn1P18608 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC9.79□□□□□ -0.84
Hmgn1P18608 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Hmgn1P18608 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.79□□□□□ -0.84
Hmgn1P18608 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.79□□□□□ -0.84
Hmgn1P18608 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.79□□□□□ -0.84
Hmgn1P18608 Gm7319-201ENSMUST00000210047 778 ntBASIC9.79□□□□□ -0.84
Hmgn1P18608 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.79□□□□□ -0.84
Hmgn1P18608 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC9.79□□□□□ -0.84
Hmgn1P18608 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Hmgn1P18608 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.79□□□□□ -0.84
Hmgn1P18608 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Hmgn1P18608 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.79□□□□□ -0.84
Hmgn1P18608 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC9.79□□□□□ -0.84
Hmgn1P18608 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Hmgn1P18608 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hmgn1P18608 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Hmgn1P18608 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Hmgn1P18608 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC9.78□□□□□ -0.84
Hmgn1P18608 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Hmgn1P18608 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.78□□□□□ -0.84
Hmgn1P18608 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Hmgn1P18608 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Gm38116-201ENSMUST00000193873 1533 ntBASIC9.78□□□□□ -0.84
Hmgn1P18608 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC9.78□□□□□ -0.84
Hmgn1P18608 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC9.78□□□□□ -0.84
Hmgn1P18608 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.78□□□□□ -0.84
Hmgn1P18608 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.78□□□□□ -0.84
Hmgn1P18608 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.78□□□□□ -0.84
Hmgn1P18608 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Hmgn1P18608 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC9.78□□□□□ -0.84
Hmgn1P18608 Gm5599-201ENSMUST00000209602 788 ntBASIC9.78□□□□□ -0.84
Hmgn1P18608 Gm8162-201ENSMUST00000213951 665 ntBASIC9.78□□□□□ -0.84
Hmgn1P18608 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.78□□□□□ -0.84
Hmgn1P18608 AC124581.2-201ENSMUST00000225459 282 ntBASIC9.78□□□□□ -0.84
Hmgn1P18608 Ginm1-202ENSMUST00000065124 300 ntBASIC9.78□□□□□ -0.84
Hmgn1P18608 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Hmgn1P18608 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Hmgn1P18608 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Hmgn1P18608 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Hmgn1P18608 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.78□□□□□ -0.84
Hmgn1P18608 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hmgn1P18608 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Hmgn1P18608 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Hmgn1P18608 Gm44926-201ENSMUST00000207898 1826 ntBASIC9.77□□□□□ -0.84
Hmgn1P18608 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Hmgn1P18608 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms