Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx1P18111 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC8.74□□□□□ -1.01
Cdx1P18111 Gm36638-202ENSMUST00000192073 2169 ntBASIC8.73□□□□□ -1.01
Cdx1P18111 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Il20rb-201ENSMUST00000098458 2793 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Cdx1P18111 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Gm12576-201ENSMUST00000135268 3036 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 9130221F21Rik-201ENSMUST00000206867 2631 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC8.73□□□□□ -1.01
Cdx1P18111 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Zfp185-201ENSMUST00000114546 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC8.73□□□□□ -1.01
Cdx1P18111 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Cdx1P18111 Gm44999-201ENSMUST00000207456 1493 ntBASIC8.73□□□□□ -1.01
Cdx1P18111 Gm26815-201ENSMUST00000181200 3366 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Cdx1P18111 Gm12857-201ENSMUST00000117678 592 ntBASIC8.73□□□□□ -1.01
Cdx1P18111 Gm11801-201ENSMUST00000117807 746 ntBASIC8.73□□□□□ -1.01
Cdx1P18111 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC8.73□□□□□ -1.01
Cdx1P18111 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC8.73□□□□□ -1.01
Cdx1P18111 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC8.73□□□□□ -1.01
Cdx1P18111 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC8.73□□□□□ -1.01
Cdx1P18111 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC8.73□□□□□ -1.01
Cdx1P18111 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC8.73□□□□□ -1.01
Cdx1P18111 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC8.73□□□□□ -1.01
Cdx1P18111 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Gm42629-201ENSMUST00000199063 1102 ntBASIC8.73□□□□□ -1.01
Cdx1P18111 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC8.73□□□□□ -1.01
Cdx1P18111 Gm45219-201ENSMUST00000205602 465 ntBASIC8.73□□□□□ -1.01
Cdx1P18111 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Cdx1P18111 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC8.73□□□□□ -1.01
Cdx1P18111 AC102569.1-201ENSMUST00000221563 685 ntBASIC8.73□□□□□ -1.01
Cdx1P18111 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Ginm1-202ENSMUST00000065124 300 ntBASIC8.73□□□□□ -1.01
Cdx1P18111 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Cdx1P18111 Ophn1-202ENSMUST00000113826 2794 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Drc3-204ENSMUST00000108723 1917 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Btn1a1-201ENSMUST00000041674 3423 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Xrcc2-201ENSMUST00000030773 3247 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Cdx1P18111 Wdr78-202ENSMUST00000036557 3479 ntTSL 5 BASIC8.73□□□□□ -1.01
Cdx1P18111 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Slc28a1-201ENSMUST00000026820 2846 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC8.73□□□□□ -1.01
Cdx1P18111 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Ighg3-202ENSMUST00000223179 2414 ntAPPRIS P5 BASIC8.73□□□□□ -1.01
Cdx1P18111 Dpf2-205ENSMUST00000136983 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Pear1-216ENSMUST00000174759 3554 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Cdx1P18111 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Fam53b-206ENSMUST00000106168 3630 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 AC123534.1-202ENSMUST00000224256 1837 ntBASIC8.73□□□□□ -1.01
Cdx1P18111 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Gm42633-201ENSMUST00000198853 2764 ntBASIC8.73□□□□□ -1.01
Cdx1P18111 Zfp672-202ENSMUST00000064786 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx1P18111 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Cdx1P18111 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC8.72□□□□□ -1.01
Cdx1P18111 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC8.72□□□□□ -1.01
Cdx1P18111 Olfr450-202ENSMUST00000218832 1899 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Cdx1P18111 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Cdx1P18111 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 BC005624-201ENSMUST00000028205 1984 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC8.72□□□□□ -1.01
Cdx1P18111 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms