Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.97□□□□□ -0.65
Hmga1P17095 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmga1P17095 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hmga1P17095 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmga1P17095 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmga1P17095 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.97□□□□□ -0.65
Hmga1P17095 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmga1P17095 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmga1P17095 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.97□□□□□ -0.65
Hmga1P17095 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Hmga1P17095 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Hmga1P17095 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC10.96□□□□□ -0.65
Hmga1P17095 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.96□□□□□ -0.65
Hmga1P17095 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Gm13120-201ENSMUST00000117343 1446 ntBASIC10.96□□□□□ -0.65
Hmga1P17095 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.96□□□□□ -0.65
Hmga1P17095 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Gm16209-201ENSMUST00000118457 627 ntBASIC10.96□□□□□ -0.65
Hmga1P17095 Gm10171-201ENSMUST00000126220 628 ntBASIC10.96□□□□□ -0.65
Hmga1P17095 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC10.96□□□□□ -0.65
Hmga1P17095 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC10.96□□□□□ -0.65
Hmga1P17095 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.96□□□□□ -0.65
Hmga1P17095 Mir1941-201ENSMUST00000157834 83 ntBASIC10.96□□□□□ -0.65
Hmga1P17095 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Gm6612-201ENSMUST00000170777 395 ntBASIC10.96□□□□□ -0.65
Hmga1P17095 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Hmga1P17095 Gm42859-201ENSMUST00000199572 193 ntBASIC10.96□□□□□ -0.65
Hmga1P17095 Gm5340-201ENSMUST00000203733 880 ntBASIC10.96□□□□□ -0.65
Hmga1P17095 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Hmga1P17095 Gm8796-201ENSMUST00000219122 936 ntBASIC10.96□□□□□ -0.65
Hmga1P17095 AC129217.1-201ENSMUST00000225181 642 ntBASIC10.96□□□□□ -0.65
Hmga1P17095 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmga1P17095 Gm6564-201ENSMUST00000075377 619 ntBASIC10.96□□□□□ -0.65
Hmga1P17095 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Hmga1P17095 Gm10233-201ENSMUST00000089275 628 ntBASIC10.96□□□□□ -0.65
Hmga1P17095 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmga1P17095 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmga1P17095 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmga1P17095 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmga1P17095 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmga1P17095 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmga1P17095 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmga1P17095 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Hmga1P17095 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Hmga1P17095 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Hmga1P17095 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmga1P17095 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Hmga1P17095 Gm38034-201ENSMUST00000193915 2069 ntBASIC10.96□□□□□ -0.66
Hmga1P17095 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.96□□□□□ -0.66
Hmga1P17095 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.95□□□□□ -0.66
Hmga1P17095 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Hmga1P17095 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Hmga1P17095 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Gm43625-201ENSMUST00000199177 1539 ntBASIC10.95□□□□□ -0.66
Hmga1P17095 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hmga1P17095 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Hmga1P17095 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Hmga1P17095 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC10.95□□□□□ -0.66
Hmga1P17095 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Hmga1P17095 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Gm26943-201ENSMUST00000182295 957 ntBASIC10.95□□□□□ -0.66
Hmga1P17095 Gm7069-201ENSMUST00000182418 1008 ntBASIC10.95□□□□□ -0.66
Hmga1P17095 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC10.95□□□□□ -0.66
Hmga1P17095 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Hmga1P17095 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Gm9515-201ENSMUST00000200276 647 ntBASIC10.95□□□□□ -0.66
Hmga1P17095 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Gm7319-201ENSMUST00000210047 778 ntBASIC10.95□□□□□ -0.66
Hmga1P17095 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Gm8557-201ENSMUST00000220777 475 ntBASIC10.95□□□□□ -0.66
Hmga1P17095 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmga1P17095 Gm5278-201ENSMUST00000055957 552 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms