Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Hoxc9P09633 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.89□□□□□ -0.19
Hoxc9P09633 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Hoxc9P09633 Gm12377-201ENSMUST00000118656 252 ntBASIC13.89□□□□□ -0.19
Hoxc9P09633 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC13.89□□□□□ -0.19
Hoxc9P09633 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC13.89□□□□□ -0.19
Hoxc9P09633 Gm44908-201ENSMUST00000208610 266 ntBASIC13.89□□□□□ -0.19
Hoxc9P09633 AC124356.1-201ENSMUST00000221469 698 ntBASIC13.89□□□□□ -0.19
Hoxc9P09633 AC157650.1-201ENSMUST00000224582 610 ntBASIC13.89□□□□□ -0.19
Hoxc9P09633 AC134860.5-201ENSMUST00000225071 1249 ntBASIC13.89□□□□□ -0.19
Hoxc9P09633 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Hoxc9P09633 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.89□□□□□ -0.19
Hoxc9P09633 Gm45675-201ENSMUST00000211202 3429 ntBASIC13.89□□□□□ -0.19
Hoxc9P09633 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Hoxc9P09633 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc9P09633 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc9P09633 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc9P09633 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc9P09633 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC13.88□□□□□ -0.19
Hoxc9P09633 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc9P09633 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc9P09633 Gm15554-201ENSMUST00000120406 913 ntBASIC13.88□□□□□ -0.19
Hoxc9P09633 Gm13792-201ENSMUST00000121350 423 ntBASIC13.88□□□□□ -0.19
Hoxc9P09633 Gm12254-201ENSMUST00000134617 471 ntBASIC13.88□□□□□ -0.19
Hoxc9P09633 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC13.88□□□□□ -0.19
Hoxc9P09633 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC13.88□□□□□ -0.19
Hoxc9P09633 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC13.88□□□□□ -0.19
Hoxc9P09633 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc9P09633 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hoxc9P09633 Gm8625-201ENSMUST00000194185 1077 ntBASIC13.88□□□□□ -0.19
Hoxc9P09633 Gm8828-201ENSMUST00000196786 1290 ntBASIC13.88□□□□□ -0.19
Hoxc9P09633 BB187690-201ENSMUST00000198619 1176 ntBASIC13.88□□□□□ -0.19
Hoxc9P09633 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc9P09633 Gm6008-201ENSMUST00000206542 874 ntBASIC13.88□□□□□ -0.19
Hoxc9P09633 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC13.88□□□□□ -0.19
Hoxc9P09633 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Hoxc9P09633 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Hoxc9P09633 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc9P09633 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc9P09633 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc9P09633 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc9P09633 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc9P09633 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Hoxc9P09633 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc9P09633 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC13.88□□□□□ -0.19
Hoxc9P09633 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Hoxc9P09633 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc9P09633 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC13.87□□□□□ -0.19
Hoxc9P09633 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC13.87□□□□□ -0.19
Hoxc9P09633 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Hoxc9P09633 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.87□□□□□ -0.19
Hoxc9P09633 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Gm12470-201ENSMUST00000117239 1049 ntBASIC13.87□□□□□ -0.19
Hoxc9P09633 Gm13286-201ENSMUST00000117750 537 ntBASIC13.87□□□□□ -0.19
Hoxc9P09633 Gm11929-201ENSMUST00000118175 945 ntBASIC13.87□□□□□ -0.19
Hoxc9P09633 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC13.87□□□□□ -0.19
Hoxc9P09633 Gm15373-201ENSMUST00000121495 214 ntBASIC13.87□□□□□ -0.19
Hoxc9P09633 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Gm26875-201ENSMUST00000181006 950 ntBASIC13.87□□□□□ -0.19
Hoxc9P09633 Mir7088-201ENSMUST00000184227 86 ntBASIC13.87□□□□□ -0.19
Hoxc9P09633 AC134537.1-201ENSMUST00000219205 265 ntBASIC13.87□□□□□ -0.19
Hoxc9P09633 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Hoxc9P09633 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc9P09633 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Hoxc9P09633 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms