Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Lect2-202ENSMUST00000225183 823 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 AC165154.1-201ENSMUST00000226661 340 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 CT010505.1-201ENSMUST00000227026 396 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm10263-201ENSMUST00000085163 300 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Hoxd3P09027 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Hoxd3P09027 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hoxd3P09027 Gm42913-201ENSMUST00000197936 1853 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC8.77□□□□□ -1.01
Hoxd3P09027 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm37859-201ENSMUST00000195529 2173 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Hoxd3P09027 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Trbv2-201ENSMUST00000103263 560 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm14021-201ENSMUST00000117683 961 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm12583-201ENSMUST00000120677 853 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm13937-201ENSMUST00000121000 988 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm15227-201ENSMUST00000121844 399 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 n-R5s84-201ENSMUST00000122591 109 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC8.76□□□□□ -1.01
Hoxd3P09027 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm26134-201ENSMUST00000178484 110 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm18800-202ENSMUST00000188688 1105 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm38210-201ENSMUST00000191944 809 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm19211-201ENSMUST00000200251 1206 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm43002-201ENSMUST00000200310 155 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm44422-201ENSMUST00000204142 1025 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm44128-201ENSMUST00000204909 219 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm20586-201ENSMUST00000210122 547 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm45240-201ENSMUST00000211437 674 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 AC114645.1-201ENSMUST00000215831 187 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC8.76□□□□□ -1.01
Hoxd3P09027 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC8.76□□□□□ -1.01
Hoxd3P09027 CT010506.1-201ENSMUST00000223673 349 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Hoxd3P09027 n-R5s211-201ENSMUST00000093689 119 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Gm37014-201ENSMUST00000194723 2253 ntBASIC8.76□□□□□ -1.01
Hoxd3P09027 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC8.76□□□□□ -1.01
Hoxd3P09027 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
Hoxd3P09027 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hoxd3P09027 AC165351.1-201ENSMUST00000219078 2020 ntBASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms