Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm6158-201ENSMUST00000109467 904 ntBASIC9.07□□□□□ -0.96
Hoxa3P02831 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm11578-201ENSMUST00000118530 459 ntBASIC9.07□□□□□ -0.96
Hoxa3P02831 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm20414-201ENSMUST00000172918 646 ntBASIC9.07□□□□□ -0.96
Hoxa3P02831 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm24328-201ENSMUST00000175104 67 ntBASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm34379-201ENSMUST00000195036 290 ntBASIC9.07□□□□□ -0.96
Hoxa3P02831 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm42660-201ENSMUST00000197733 947 ntBASIC9.07□□□□□ -0.96
Hoxa3P02831 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm44647-201ENSMUST00000207402 428 ntBASIC9.07□□□□□ -0.96
Hoxa3P02831 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC9.07□□□□□ -0.96
Hoxa3P02831 CT030166.5-201ENSMUST00000222249 420 ntBASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC9.07□□□□□ -0.96
Hoxa3P02831 CT025618.1-203ENSMUST00000227008 589 ntBASIC9.07□□□□□ -0.96
Hoxa3P02831 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.07□□□□□ -0.96
Hoxa3P02831 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm10652-201ENSMUST00000199790 2622 ntBASIC9.07□□□□□ -0.96
Hoxa3P02831 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.07□□□□□ -0.96
Hoxa3P02831 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hoxa3P02831 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.07□□□□□ -0.96
Hoxa3P02831 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.06□□□□□ -0.96
Hoxa3P02831 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.06□□□□□ -0.96
Hoxa3P02831 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Hoxa3P02831 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Hoxa3P02831 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hoxa3P02831 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC9.06□□□□□ -0.96
Hoxa3P02831 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Hoxa3P02831 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 Gm5529-201ENSMUST00000165691 891 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hoxa3P02831 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.06□□□□□ -0.96
Hoxa3P02831 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hoxa3P02831 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms