Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Gm13910-201ENSMUST00000121752 1428 ntBASIC8.83□□□□□ -1
Hmgb3O54879 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hmgb3O54879 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Gm25148-201ENSMUST00000104611 123 ntBASIC8.83□□□□□ -1
Hmgb3O54879 Gm8111-201ENSMUST00000117659 987 ntBASIC8.83□□□□□ -1
Hmgb3O54879 Gm12857-201ENSMUST00000117678 592 ntBASIC8.83□□□□□ -1
Hmgb3O54879 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC8.83□□□□□ -1
Hmgb3O54879 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hmgb3O54879 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Gm27501-201ENSMUST00000183599 107 ntBASIC8.83□□□□□ -1
Hmgb3O54879 Gm27516-201ENSMUST00000184237 98 ntBASIC8.83□□□□□ -1
Hmgb3O54879 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC8.83□□□□□ -1
Hmgb3O54879 Gm5714-201ENSMUST00000197343 566 ntBASIC8.83□□□□□ -1
Hmgb3O54879 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hmgb3O54879 Gm9368-201ENSMUST00000219348 831 ntBASIC8.83□□□□□ -1
Hmgb3O54879 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Hmgb3O54879 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hmgb3O54879 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC8.83□□□□□ -1
Hmgb3O54879 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hmgb3O54879 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Gm8320-201ENSMUST00000177584 1762 ntBASIC8.83□□□□□ -1
Hmgb3O54879 Gm8303-201ENSMUST00000178371 1762 ntBASIC8.83□□□□□ -1
Hmgb3O54879 Gm8331-201ENSMUST00000178433 1762 ntBASIC8.83□□□□□ -1
Hmgb3O54879 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hmgb3O54879 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC8.83□□□□□ -1
Hmgb3O54879 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Gm6768-201ENSMUST00000022467 1878 ntBASIC8.83□□□□□ -1
Hmgb3O54879 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 St5-202ENSMUST00000079282 4255 ntAPPRIS P4 TSL 5 BASIC8.83□□□□□ -1
Hmgb3O54879 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Sall1-201ENSMUST00000034090 5265 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Dpp4-201ENSMUST00000047812 5268 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC8.82□□□□□ -1
Hmgb3O54879 Tle3-217ENSMUST00000162973 4114 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Hmgb3O54879 Gmeb2-201ENSMUST00000049032 4121 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC8.82□□□□□ -1
Hmgb3O54879 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC8.82□□□□□ -1
Hmgb3O54879 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Hmgb3O54879 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
Hmgb3O54879 Gm37264-201ENSMUST00000194916 2192 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC8.82□□□□□ -1
Hmgb3O54879 Gm6092-201ENSMUST00000121659 2029 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC8.82□□□□□ -1
Hmgb3O54879 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC8.82□□□□□ -1
Hmgb3O54879 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Trav4d-2-201ENSMUST00000120914 335 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Gm15549-201ENSMUST00000121595 622 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC8.82□□□□□ -1
Hmgb3O54879 Gm8062-201ENSMUST00000139696 444 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC8.82□□□□□ -1
Hmgb3O54879 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC8.82□□□□□ -1
Hmgb3O54879 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC8.82□□□□□ -1
Hmgb3O54879 Gm8815-201ENSMUST00000173809 620 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Mir7677-201ENSMUST00000184226 67 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Mrip-ps-201ENSMUST00000184613 940 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Gm3332-201ENSMUST00000189337 928 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Gm43058-201ENSMUST00000197645 625 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Gm42859-201ENSMUST00000199572 193 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Gm7504-201ENSMUST00000201449 424 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC8.82□□□□□ -1
Hmgb3O54879 Gm6867-201ENSMUST00000219165 425 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Gm21027-201ENSMUST00000219300 1236 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 AC122371.3-201ENSMUST00000223402 1061 ntBASIC8.82□□□□□ -1
Hmgb3O54879 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
Hmgb3O54879 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC8.82□□□□□ -1
Hmgb3O54879 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC8.82□□□□□ -1
Hmgb3O54879 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Hmgb3O54879 1700020I14Rik-202ENSMUST00000153581 8300 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb3O54879 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms