Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc1a6O35544 Gm18466-201ENSMUST00000209147 499 ntBASIC10.56□□□□□ -0.72
Slc1a6O35544 Gm5599-201ENSMUST00000209602 788 ntBASIC10.56□□□□□ -0.72
Slc1a6O35544 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Slc1a6O35544 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.56□□□□□ -0.72
Slc1a6O35544 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc1a6O35544 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc1a6O35544 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.56□□□□□ -0.72
Slc1a6O35544 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc1a6O35544 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc1a6O35544 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc1a6O35544 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc1a6O35544 Gm37909-201ENSMUST00000193157 2159 ntBASIC10.56□□□□□ -0.72
Slc1a6O35544 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc1a6O35544 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Slc1a6O35544 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc1a6O35544 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc1a6O35544 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc1a6O35544 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Slc1a6O35544 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc1a6O35544 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc1a6O35544 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc1a6O35544 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc1a6O35544 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Slc1a6O35544 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.55□□□□□ -0.72
Slc1a6O35544 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Slc1a6O35544 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.55□□□□□ -0.72
Slc1a6O35544 Mir1893-201ENSMUST00000122565 83 ntBASIC10.55□□□□□ -0.72
Slc1a6O35544 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.55□□□□□ -0.72
Slc1a6O35544 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.55□□□□□ -0.72
Slc1a6O35544 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Slc1a6O35544 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.55□□□□□ -0.72
Slc1a6O35544 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Slc1a6O35544 Gm7319-201ENSMUST00000210047 778 ntBASIC10.55□□□□□ -0.72
Slc1a6O35544 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.55□□□□□ -0.72
Slc1a6O35544 Ginm1-202ENSMUST00000065124 300 ntBASIC10.55□□□□□ -0.72
Slc1a6O35544 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Slc1a6O35544 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Slc1a6O35544 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Slc1a6O35544 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.55□□□□□ -0.72
Slc1a6O35544 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Slc1a6O35544 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Slc1a6O35544 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Slc1a6O35544 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Slc1a6O35544 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Slc1a6O35544 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC10.54□□□□□ -0.72
Slc1a6O35544 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.54□□□□□ -0.72
Slc1a6O35544 Gm38116-201ENSMUST00000193873 1533 ntBASIC10.54□□□□□ -0.72
Slc1a6O35544 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Slc1a6O35544 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.54□□□□□ -0.72
Slc1a6O35544 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Slc1a6O35544 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.54□□□□□ -0.72
Slc1a6O35544 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Slc1a6O35544 Gm16165-201ENSMUST00000160140 795 ntBASIC10.54□□□□□ -0.72
Slc1a6O35544 Gm6407-201ENSMUST00000176468 549 ntBASIC10.54□□□□□ -0.72
Slc1a6O35544 Gm21092-201ENSMUST00000178995 955 ntBASIC10.54□□□□□ -0.72
Slc1a6O35544 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc1a6O35544 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms