Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.97□□□□□ -0.81
TprF6ZDS4 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Mir683-2-201ENSMUST00000102099 109 ntBASIC9.97□□□□□ -0.81
TprF6ZDS4 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC9.97□□□□□ -0.81
TprF6ZDS4 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC9.97□□□□□ -0.81
TprF6ZDS4 Gm23899-201ENSMUST00000158112 90 ntBASIC9.97□□□□□ -0.81
TprF6ZDS4 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC9.97□□□□□ -0.81
TprF6ZDS4 Gm16301-201ENSMUST00000161959 295 ntBASIC9.97□□□□□ -0.81
TprF6ZDS4 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
TprF6ZDS4 Mir683-1-201ENSMUST00000179371 109 ntBASIC9.97□□□□□ -0.81
TprF6ZDS4 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Gm4960-201ENSMUST00000182928 1001 ntBASIC9.97□□□□□ -0.81
TprF6ZDS4 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Rp1-202ENSMUST00000194992 858 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.97□□□□□ -0.81
TprF6ZDS4 AC163638.2-201ENSMUST00000224920 827 ntBASIC9.97□□□□□ -0.81
TprF6ZDS4 Gm10254-201ENSMUST00000052888 867 ntBASIC9.97□□□□□ -0.81
TprF6ZDS4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
TprF6ZDS4 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
TprF6ZDS4 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Adamtsl4-201ENSMUST00000015994 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
TprF6ZDS4 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC9.97□□□□□ -0.81
TprF6ZDS4 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TprF6ZDS4 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
TprF6ZDS4 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TprF6ZDS4 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
TprF6ZDS4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TprF6ZDS4 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC9.96□□□□□ -0.81
TprF6ZDS4 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TprF6ZDS4 Gm12947-201ENSMUST00000116114 420 ntBASIC9.96□□□□□ -0.81
TprF6ZDS4 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC9.96□□□□□ -0.81
TprF6ZDS4 Gm8659-201ENSMUST00000120024 1084 ntBASIC9.96□□□□□ -0.81
TprF6ZDS4 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC9.96□□□□□ -0.81
TprF6ZDS4 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
TprF6ZDS4 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC9.96□□□□□ -0.81
TprF6ZDS4 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TprF6ZDS4 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC9.96□□□□□ -0.81
TprF6ZDS4 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC9.96□□□□□ -0.81
TprF6ZDS4 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC9.96□□□□□ -0.81
TprF6ZDS4 Gm25591-201ENSMUST00000177317 94 ntBASIC9.96□□□□□ -0.81
TprF6ZDS4 Gm8170-201ENSMUST00000218581 945 ntBASIC9.96□□□□□ -0.81
TprF6ZDS4 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TprF6ZDS4 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
TprF6ZDS4 Gm10020-201ENSMUST00000081993 612 ntBASIC9.96□□□□□ -0.81
TprF6ZDS4 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
TprF6ZDS4 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.96□□□□□ -0.81
TprF6ZDS4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC9.96□□□□□ -0.81
TprF6ZDS4 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
TprF6ZDS4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.96□□□□□ -0.81
TprF6ZDS4 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC9.96□□□□□ -0.81
TprF6ZDS4 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TprF6ZDS4 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.96□□□□□ -0.81
TprF6ZDS4 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
TprF6ZDS4 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TprF6ZDS4 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
TprF6ZDS4 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TprF6ZDS4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
TprF6ZDS4 Gm38034-201ENSMUST00000193915 2069 ntBASIC9.96□□□□□ -0.81
TprF6ZDS4 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
TprF6ZDS4 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
TprF6ZDS4 Gm42833-201ENSMUST00000196019 2124 ntBASIC9.96□□□□□ -0.82
TprF6ZDS4 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
TprF6ZDS4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
TprF6ZDS4 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
TprF6ZDS4 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
TprF6ZDS4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
TprF6ZDS4 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
TprF6ZDS4 Gm13777-201ENSMUST00000118208 345 ntBASIC9.96□□□□□ -0.82
TprF6ZDS4 Gm8754-201ENSMUST00000118391 520 ntBASIC9.96□□□□□ -0.82
TprF6ZDS4 Gm6238-201ENSMUST00000120999 465 ntBASIC9.96□□□□□ -0.82
TprF6ZDS4 Gm15727-201ENSMUST00000122416 437 ntBASIC9.96□□□□□ -0.82
TprF6ZDS4 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC9.96□□□□□ -0.82
TprF6ZDS4 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.82
TprF6ZDS4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
TprF6ZDS4 CT009713.2-201ENSMUST00000225532 1149 ntBASIC9.96□□□□□ -0.82
TprF6ZDS4 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
TprF6ZDS4 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
TprF6ZDS4 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC9.96□□□□□ -0.82
TprF6ZDS4 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
TprF6ZDS4 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
TprF6ZDS4 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
TprF6ZDS4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms