Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Gm12389-201ENSMUST00000117696 418 ntBASIC11.09□□□□□ -0.63
Atf6F6VAN0 Gm12516-201ENSMUST00000120819 385 ntBASIC11.09□□□□□ -0.63
Atf6F6VAN0 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.09□□□□□ -0.63
Atf6F6VAN0 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Gm8531-201ENSMUST00000188319 893 ntBASIC11.09□□□□□ -0.63
Atf6F6VAN0 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Gm32111-201ENSMUST00000207689 846 ntBASIC11.09□□□□□ -0.63
Atf6F6VAN0 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.09□□□□□ -0.63
Atf6F6VAN0 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.09□□□□□ -0.63
Atf6F6VAN0 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Gm37697-201ENSMUST00000195680 1844 ntBASIC11.09□□□□□ -0.63
Atf6F6VAN0 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Atf6F6VAN0 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Atf6F6VAN0 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Atf6F6VAN0 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.08□□□□□ -0.64
Atf6F6VAN0 Gm11380-201ENSMUST00000118067 560 ntBASIC11.08□□□□□ -0.64
Atf6F6VAN0 Gm13888-201ENSMUST00000119148 422 ntBASIC11.08□□□□□ -0.64
Atf6F6VAN0 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.08□□□□□ -0.64
Atf6F6VAN0 Gm5523-201ENSMUST00000180415 997 ntBASIC11.08□□□□□ -0.64
Atf6F6VAN0 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Gm44158-201ENSMUST00000203881 505 ntBASIC11.08□□□□□ -0.64
Atf6F6VAN0 Gm33080-201ENSMUST00000205429 172 ntBASIC11.08□□□□□ -0.64
Atf6F6VAN0 Gm44814-201ENSMUST00000207018 434 ntBASIC11.08□□□□□ -0.64
Atf6F6VAN0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Atf6F6VAN0 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.08□□□□□ -0.64
Atf6F6VAN0 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.08□□□□□ -0.64
Atf6F6VAN0 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.08□□□□□ -0.64
Atf6F6VAN0 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms