Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 AC133598.5-201ENSMUST00000224937 1517 ntBASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm16045-201ENSMUST00000123882 2969 ntTSL 5 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Sltm-201ENSMUST00000049263 3691 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 D030018L15Rik-203ENSMUST00000140253 2902 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Tmem167b-201ENSMUST00000090546 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Irx6-202ENSMUST00000167261 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm20743-202ENSMUST00000194322 2830 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Dntt-202ENSMUST00000112200 2068 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm3287-205ENSMUST00000228893 1332 ntBASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Sdr42e1-202ENSMUST00000173522 2615 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Sept2-213ENSMUST00000168776 3267 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 C2-205ENSMUST00000148431 1946 ntTSL 5 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm25287-201ENSMUST00000103846 110 ntBASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm22918-201ENSMUST00000103855 110 ntBASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm5419-201ENSMUST00000119301 527 ntBASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm16199-201ENSMUST00000160032 288 ntBASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm6659-201ENSMUST00000174752 547 ntBASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Aldh3b3-202ENSMUST00000179433 3827 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm27622-201ENSMUST00000183779 60 ntBASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm44008-201ENSMUST00000204345 412 ntBASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm9619-201ENSMUST00000211587 762 ntBASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 AC155258.1-201ENSMUST00000219303 253 ntBASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Sycp1-202ENSMUST00000196988 3189 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 BC026762-201ENSMUST00000206555 2503 ntBASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Top3a-201ENSMUST00000002891 3741 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm2447-202ENSMUST00000193813 1815 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Kctd19-201ENSMUST00000063071 3048 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Ldb2-205ENSMUST00000199261 2367 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Pvr-201ENSMUST00000043517 2905 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm13128-201ENSMUST00000105751 1745 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Tbc1d24-207ENSMUST00000171189 4592 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm43511-201ENSMUST00000197084 2297 ntBASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Srpx2-202ENSMUST00000113304 2848 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm34424-202ENSMUST00000214104 1652 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Rpgr-204ENSMUST00000115532 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Zbtb8os-204ENSMUST00000141235 3833 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Rab11fip3-201ENSMUST00000118828 3271 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm37593-201ENSMUST00000191669 3254 ntBASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Plekho2-201ENSMUST00000068944 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 4933427I04Rik-201ENSMUST00000097896 2183 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Amph-204ENSMUST00000200466 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Nell2-201ENSMUST00000075275 2675 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 AC122197.1-201ENSMUST00000220281 2142 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Npy4r-201ENSMUST00000052164 3627 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Gm3880A0A1B0GSB3 Plat-201ENSMUST00000033941 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Gm3880A0A1B0GSB3 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Gm3880A0A1B0GSB3 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Gm3880A0A1B0GSB3 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Gm3880A0A1B0GSB3 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Gm3880A0A1B0GSB3 Osbpl3-203ENSMUST00000114466 2916 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Gm3880A0A1B0GSB3 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm37522-201ENSMUST00000195437 2884 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms