Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mrpl40Q9Z2Q5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mrpl40Q9Z2Q5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mrpl40Q9Z2Q5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Mrpl40Q9Z2Q5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Mrpl40Q9Z2Q5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mrpl40Q9Z2Q5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Mrpl40Q9Z2Q5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Mrpl40Q9Z2Q5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mrpl40Q9Z2Q5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mrpl40Q9Z2Q5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Mrpl40Q9Z2Q5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Mrpl40Q9Z2Q5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Mrpl40Q9Z2Q5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mrpl40Q9Z2Q5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mrpl40Q9Z2Q5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mrpl40Q9Z2Q5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Mrpl40Q9Z2Q5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.88■□□□□ 0.77
Mrpl40Q9Z2Q5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mrpl40Q9Z2Q5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Mrpl40Q9Z2Q5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mrpl40Q9Z2Q5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Gm43137-201ENSMUST00000198052 594 ntBASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mrpl40Q9Z2Q5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mrpl40Q9Z2Q5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.86■□□□□ 0.77
Mrpl40Q9Z2Q5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mrpl40Q9Z2Q5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mrpl40Q9Z2Q5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mrpl40Q9Z2Q5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mrpl40Q9Z2Q5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Mrpl40Q9Z2Q5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Mrpl40Q9Z2Q5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mrpl40Q9Z2Q5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Mrpl40Q9Z2Q5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mrpl40Q9Z2Q5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mrpl40Q9Z2Q5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mrpl40Q9Z2Q5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Mrpl40Q9Z2Q5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mrpl40Q9Z2Q5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Mrpl40Q9Z2Q5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Mrpl40Q9Z2Q5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Mrpl40Q9Z2Q5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mrpl40Q9Z2Q5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mrpl40Q9Z2Q5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Mrpl40Q9Z2Q5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mrpl40Q9Z2Q5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Mrpl40Q9Z2Q5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.84■□□□□ 0.77
Mrpl40Q9Z2Q5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.84■□□□□ 0.77
Mrpl40Q9Z2Q5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Mrpl40Q9Z2Q5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mrpl40Q9Z2Q5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mrpl40Q9Z2Q5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mrpl40Q9Z2Q5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.83■□□□□ 0.77
Mrpl40Q9Z2Q5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mrpl40Q9Z2Q5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mrpl40Q9Z2Q5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mrpl40Q9Z2Q5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Mrpl40Q9Z2Q5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Mrpl40Q9Z2Q5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mrpl40Q9Z2Q5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mrpl40Q9Z2Q5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mrpl40Q9Z2Q5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Mrpl40Q9Z2Q5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mrpl40Q9Z2Q5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.82■□□□□ 0.76
Mrpl40Q9Z2Q5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Mrpl40Q9Z2Q5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mrpl40Q9Z2Q5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mrpl40Q9Z2Q5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mrpl40Q9Z2Q5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.81■□□□□ 0.76
Mrpl40Q9Z2Q5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Mrpl40Q9Z2Q5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Mrpl40Q9Z2Q5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mrpl40Q9Z2Q5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Mrpl40Q9Z2Q5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mrpl40Q9Z2Q5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Mrpl40Q9Z2Q5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.8■□□□□ 0.76
Mrpl40Q9Z2Q5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mrpl40Q9Z2Q5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Mrpl40Q9Z2Q5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mrpl40Q9Z2Q5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mrpl40Q9Z2Q5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.79■□□□□ 0.76
Mrpl40Q9Z2Q5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mrpl40Q9Z2Q5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.79■□□□□ 0.76
Mrpl40Q9Z2Q5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms