Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
ClcnkaQ9WUB7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClcnkaQ9WUB7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.39■□□□□ 0.53
ClcnkaQ9WUB7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClcnkaQ9WUB7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClcnkaQ9WUB7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
ClcnkaQ9WUB7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClcnkaQ9WUB7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClcnkaQ9WUB7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClcnkaQ9WUB7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ClcnkaQ9WUB7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClcnkaQ9WUB7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.38■□□□□ 0.53
ClcnkaQ9WUB7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClcnkaQ9WUB7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.38■□□□□ 0.53
ClcnkaQ9WUB7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ClcnkaQ9WUB7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.38■□□□□ 0.53
ClcnkaQ9WUB7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClcnkaQ9WUB7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClcnkaQ9WUB7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClcnkaQ9WUB7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ClcnkaQ9WUB7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ClcnkaQ9WUB7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
ClcnkaQ9WUB7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.37■□□□□ 0.53
ClcnkaQ9WUB7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.37■□□□□ 0.53
ClcnkaQ9WUB7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
ClcnkaQ9WUB7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClcnkaQ9WUB7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ClcnkaQ9WUB7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ClcnkaQ9WUB7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.36■□□□□ 0.53
ClcnkaQ9WUB7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.36■□□□□ 0.53
ClcnkaQ9WUB7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ClcnkaQ9WUB7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.36■□□□□ 0.53
ClcnkaQ9WUB7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClcnkaQ9WUB7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClcnkaQ9WUB7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClcnkaQ9WUB7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ClcnkaQ9WUB7 Golph3-202ENSMUST00000226517 2359 ntBASIC18.35■□□□□ 0.53
ClcnkaQ9WUB7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ClcnkaQ9WUB7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.35■□□□□ 0.53
ClcnkaQ9WUB7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ClcnkaQ9WUB7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ClcnkaQ9WUB7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ClcnkaQ9WUB7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClcnkaQ9WUB7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClcnkaQ9WUB7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClcnkaQ9WUB7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClcnkaQ9WUB7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ClcnkaQ9WUB7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClcnkaQ9WUB7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClcnkaQ9WUB7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.34■□□□□ 0.53
ClcnkaQ9WUB7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClcnkaQ9WUB7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClcnkaQ9WUB7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClcnkaQ9WUB7 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.34■□□□□ 0.53
ClcnkaQ9WUB7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClcnkaQ9WUB7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ClcnkaQ9WUB7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClcnkaQ9WUB7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClcnkaQ9WUB7 Iqck-206ENSMUST00000208658 2891 ntBASIC18.34■□□□□ 0.53
ClcnkaQ9WUB7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ClcnkaQ9WUB7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ClcnkaQ9WUB7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ClcnkaQ9WUB7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClcnkaQ9WUB7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ClcnkaQ9WUB7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClcnkaQ9WUB7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ClcnkaQ9WUB7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClcnkaQ9WUB7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.33■□□□□ 0.52
ClcnkaQ9WUB7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.33■□□□□ 0.52
ClcnkaQ9WUB7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClcnkaQ9WUB7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClcnkaQ9WUB7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClcnkaQ9WUB7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ClcnkaQ9WUB7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClcnkaQ9WUB7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ClcnkaQ9WUB7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ClcnkaQ9WUB7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClcnkaQ9WUB7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ClcnkaQ9WUB7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClcnkaQ9WUB7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClcnkaQ9WUB7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClcnkaQ9WUB7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ClcnkaQ9WUB7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClcnkaQ9WUB7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClcnkaQ9WUB7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClcnkaQ9WUB7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ClcnkaQ9WUB7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClcnkaQ9WUB7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ClcnkaQ9WUB7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ClcnkaQ9WUB7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClcnkaQ9WUB7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms