Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.95■■□□□ 1.1
Prpf40aQ9R1C7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.95■■□□□ 1.1
Prpf40aQ9R1C7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
Prpf40aQ9R1C7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf40aQ9R1C7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf40aQ9R1C7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf40aQ9R1C7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf40aQ9R1C7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Prpf40aQ9R1C7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf40aQ9R1C7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Prpf40aQ9R1C7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf40aQ9R1C7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf40aQ9R1C7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf40aQ9R1C7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40aQ9R1C7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40aQ9R1C7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40aQ9R1C7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40aQ9R1C7 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.94■■□□□ 1.1
Prpf40aQ9R1C7 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.94■■□□□ 1.1
Prpf40aQ9R1C7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40aQ9R1C7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40aQ9R1C7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40aQ9R1C7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40aQ9R1C7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.93■■□□□ 1.1
Prpf40aQ9R1C7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.93■■□□□ 1.1
Prpf40aQ9R1C7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.93■■□□□ 1.1
Prpf40aQ9R1C7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf40aQ9R1C7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf40aQ9R1C7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf40aQ9R1C7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf40aQ9R1C7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf40aQ9R1C7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.92■■□□□ 1.1
Prpf40aQ9R1C7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.92■■□□□ 1.1
Prpf40aQ9R1C7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf40aQ9R1C7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf40aQ9R1C7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf40aQ9R1C7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf40aQ9R1C7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40aQ9R1C7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Prpf40aQ9R1C7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40aQ9R1C7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40aQ9R1C7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40aQ9R1C7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40aQ9R1C7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40aQ9R1C7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40aQ9R1C7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40aQ9R1C7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40aQ9R1C7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40aQ9R1C7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40aQ9R1C7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40aQ9R1C7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Prpf40aQ9R1C7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Prpf40aQ9R1C7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf40aQ9R1C7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.89■■□□□ 1.09
Prpf40aQ9R1C7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.89■■□□□ 1.09
Prpf40aQ9R1C7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.89■■□□□ 1.09
Prpf40aQ9R1C7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf40aQ9R1C7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf40aQ9R1C7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.89■■□□□ 1.09
Prpf40aQ9R1C7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf40aQ9R1C7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
Prpf40aQ9R1C7 Gm9847-201ENSMUST00000052528 599 ntBASIC21.88■■□□□ 1.09
Prpf40aQ9R1C7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40aQ9R1C7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40aQ9R1C7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40aQ9R1C7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40aQ9R1C7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40aQ9R1C7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40aQ9R1C7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf40aQ9R1C7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf40aQ9R1C7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf40aQ9R1C7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf40aQ9R1C7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Prpf40aQ9R1C7 Gm43530-201ENSMUST00000195920 274 ntBASIC21.87■■□□□ 1.09
Prpf40aQ9R1C7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf40aQ9R1C7 Golgb1-201ENSMUST00000023534 498 ntBASIC21.87■■□□□ 1.09
Prpf40aQ9R1C7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf40aQ9R1C7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Prpf40aQ9R1C7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf40aQ9R1C7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.86■■□□□ 1.09
Prpf40aQ9R1C7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Prpf40aQ9R1C7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Prpf40aQ9R1C7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.86■■□□□ 1.09
Prpf40aQ9R1C7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Prpf40aQ9R1C7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms