Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp2Q9R061 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nubp2Q9R061 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp2Q9R061 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp2Q9R061 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp2Q9R061 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp2Q9R061 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nubp2Q9R061 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.64■□□□□ 0.41
Nubp2Q9R061 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp2Q9R061 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp2Q9R061 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nubp2Q9R061 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp2Q9R061 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp2Q9R061 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Nubp2Q9R061 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nubp2Q9R061 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nubp2Q9R061 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nubp2Q9R061 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nubp2Q9R061 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.63■□□□□ 0.41
Nubp2Q9R061 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nubp2Q9R061 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.63■□□□□ 0.41
Nubp2Q9R061 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nubp2Q9R061 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nubp2Q9R061 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nubp2Q9R061 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nubp2Q9R061 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nubp2Q9R061 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nubp2Q9R061 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.62■□□□□ 0.41
Nubp2Q9R061 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nubp2Q9R061 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nubp2Q9R061 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nubp2Q9R061 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nubp2Q9R061 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nubp2Q9R061 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.62■□□□□ 0.41
Nubp2Q9R061 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nubp2Q9R061 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nubp2Q9R061 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.61■□□□□ 0.41
Nubp2Q9R061 Gm21956-201ENSMUST00000179946 522 ntBASIC17.61■□□□□ 0.41
Nubp2Q9R061 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.61■□□□□ 0.41
Nubp2Q9R061 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nubp2Q9R061 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nubp2Q9R061 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nubp2Q9R061 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nubp2Q9R061 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nubp2Q9R061 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.6■□□□□ 0.41
Nubp2Q9R061 Golgb1-201ENSMUST00000023534 498 ntBASIC17.6■□□□□ 0.41
Nubp2Q9R061 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nubp2Q9R061 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nubp2Q9R061 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nubp2Q9R061 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nubp2Q9R061 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nubp2Q9R061 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nubp2Q9R061 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nubp2Q9R061 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nubp2Q9R061 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nubp2Q9R061 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.59■□□□□ 0.41
Nubp2Q9R061 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp2Q9R061 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nubp2Q9R061 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nubp2Q9R061 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nubp2Q9R061 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Nubp2Q9R061 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nubp2Q9R061 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.58■□□□□ 0.4
Nubp2Q9R061 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Nubp2Q9R061 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Nubp2Q9R061 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nubp2Q9R061 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms