Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfx5Q9JL61 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rfx5Q9JL61 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Rfx5Q9JL61 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.27■■□□□ 1
Rfx5Q9JL61 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rfx5Q9JL61 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rfx5Q9JL61 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.27■■□□□ 1
Rfx5Q9JL61 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.27■■□□□ 1
Rfx5Q9JL61 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rfx5Q9JL61 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rfx5Q9JL61 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Rfx5Q9JL61 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx5Q9JL61 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx5Q9JL61 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.26■□□□□ 0.99
Rfx5Q9JL61 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx5Q9JL61 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx5Q9JL61 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Rfx5Q9JL61 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.26■□□□□ 0.99
Rfx5Q9JL61 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx5Q9JL61 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rfx5Q9JL61 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.26■□□□□ 0.99
Rfx5Q9JL61 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx5Q9JL61 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx5Q9JL61 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Rfx5Q9JL61 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx5Q9JL61 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx5Q9JL61 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx5Q9JL61 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx5Q9JL61 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx5Q9JL61 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.25■□□□□ 0.99
Rfx5Q9JL61 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx5Q9JL61 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx5Q9JL61 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Rfx5Q9JL61 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.25■□□□□ 0.99
Rfx5Q9JL61 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.25■□□□□ 0.99
Rfx5Q9JL61 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.24■□□□□ 0.99
Rfx5Q9JL61 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx5Q9JL61 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.24■□□□□ 0.99
Rfx5Q9JL61 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Rfx5Q9JL61 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx5Q9JL61 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rfx5Q9JL61 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx5Q9JL61 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx5Q9JL61 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx5Q9JL61 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx5Q9JL61 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx5Q9JL61 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx5Q9JL61 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.23■□□□□ 0.99
Rfx5Q9JL61 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.23■□□□□ 0.99
Rfx5Q9JL61 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx5Q9JL61 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx5Q9JL61 Mir7075-201ENSMUST00000184187 82 ntBASIC21.23■□□□□ 0.99
Rfx5Q9JL61 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Rfx5Q9JL61 Notumos-201ENSMUST00000151998 2659 ntBASIC21.23■□□□□ 0.99
Rfx5Q9JL61 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx5Q9JL61 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx5Q9JL61 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rfx5Q9JL61 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Rfx5Q9JL61 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx5Q9JL61 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx5Q9JL61 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx5Q9JL61 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx5Q9JL61 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.22■□□□□ 0.99
Rfx5Q9JL61 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx5Q9JL61 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Rfx5Q9JL61 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx5Q9JL61 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx5Q9JL61 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx5Q9JL61 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.21■□□□□ 0.99
Rfx5Q9JL61 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx5Q9JL61 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx5Q9JL61 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rfx5Q9JL61 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx5Q9JL61 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Rfx5Q9JL61 Gm6139-201ENSMUST00000079261 882 ntBASIC21.21■□□□□ 0.99
Rfx5Q9JL61 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx5Q9JL61 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
Rfx5Q9JL61 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.21■□□□□ 0.99
Rfx5Q9JL61 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx5Q9JL61 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx5Q9JL61 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx5Q9JL61 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx5Q9JL61 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rfx5Q9JL61 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.2■□□□□ 0.98
Rfx5Q9JL61 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.2■□□□□ 0.98
Rfx5Q9JL61 Spcs1-204ENSMUST00000226782 949 ntBASIC21.2■□□□□ 0.98
Rfx5Q9JL61 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx5Q9JL61 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rfx5Q9JL61 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx5Q9JL61 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rfx5Q9JL61 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx5Q9JL61 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx5Q9JL61 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx5Q9JL61 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.19■□□□□ 0.98
Rfx5Q9JL61 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
Rfx5Q9JL61 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx5Q9JL61 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx5Q9JL61 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rfx5Q9JL61 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx5Q9JL61 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms