Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rbfox1Q9JJ43 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rbfox1Q9JJ43 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rbfox1Q9JJ43 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbfox1Q9JJ43 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbfox1Q9JJ43 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Rbfox1Q9JJ43 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbfox1Q9JJ43 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.01■□□□□ 0.31
Rbfox1Q9JJ43 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
Rbfox1Q9JJ43 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbfox1Q9JJ43 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbfox1Q9JJ43 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rbfox1Q9JJ43 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbfox1Q9JJ43 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbfox1Q9JJ43 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbfox1Q9JJ43 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rbfox1Q9JJ43 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rbfox1Q9JJ43 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17■□□□□ 0.31
Rbfox1Q9JJ43 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rbfox1Q9JJ43 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rbfox1Q9JJ43 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rbfox1Q9JJ43 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rbfox1Q9JJ43 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rbfox1Q9JJ43 Gm40881-201ENSMUST00000223397 166 ntBASIC17■□□□□ 0.31
Rbfox1Q9JJ43 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rbfox1Q9JJ43 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rbfox1Q9JJ43 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rbfox1Q9JJ43 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rbfox1Q9JJ43 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rbfox1Q9JJ43 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rbfox1Q9JJ43 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rbfox1Q9JJ43 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.99■□□□□ 0.31
Rbfox1Q9JJ43 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.99■□□□□ 0.31
Rbfox1Q9JJ43 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rbfox1Q9JJ43 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.99■□□□□ 0.31
Rbfox1Q9JJ43 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rbfox1Q9JJ43 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Rbfox1Q9JJ43 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rbfox1Q9JJ43 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rbfox1Q9JJ43 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rbfox1Q9JJ43 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rbfox1Q9JJ43 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rbfox1Q9JJ43 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rbfox1Q9JJ43 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rbfox1Q9JJ43 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Rbfox1Q9JJ43 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Rbfox1Q9JJ43 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.97■□□□□ 0.31
Rbfox1Q9JJ43 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rbfox1Q9JJ43 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rbfox1Q9JJ43 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rbfox1Q9JJ43 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rbfox1Q9JJ43 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rbfox1Q9JJ43 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rbfox1Q9JJ43 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rbfox1Q9JJ43 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rbfox1Q9JJ43 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rbfox1Q9JJ43 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rbfox1Q9JJ43 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rbfox1Q9JJ43 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rbfox1Q9JJ43 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Rbfox1Q9JJ43 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.96■□□□□ 0.31
Rbfox1Q9JJ43 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rbfox1Q9JJ43 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rbfox1Q9JJ43 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.96■□□□□ 0.31
Rbfox1Q9JJ43 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rbfox1Q9JJ43 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rbfox1Q9JJ43 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rbfox1Q9JJ43 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rbfox1Q9JJ43 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rbfox1Q9JJ43 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbfox1Q9JJ43 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbfox1Q9JJ43 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.94■□□□□ 0.3
Rbfox1Q9JJ43 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbfox1Q9JJ43 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbfox1Q9JJ43 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbfox1Q9JJ43 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rbfox1Q9JJ43 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.94■□□□□ 0.3
Rbfox1Q9JJ43 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.94■□□□□ 0.3
Rbfox1Q9JJ43 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rbfox1Q9JJ43 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbfox1Q9JJ43 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rbfox1Q9JJ43 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rbfox1Q9JJ43 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.93■□□□□ 0.3
Rbfox1Q9JJ43 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms