Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Nup50Q9JIH2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup50Q9JIH2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup50Q9JIH2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.2■□□□□ 0.98
Nup50Q9JIH2 Gm5812-201ENSMUST00000061073 957 ntBASIC21.2■□□□□ 0.98
Nup50Q9JIH2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup50Q9JIH2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup50Q9JIH2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nup50Q9JIH2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nup50Q9JIH2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nup50Q9JIH2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nup50Q9JIH2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.19■□□□□ 0.98
Nup50Q9JIH2 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.19■□□□□ 0.98
Nup50Q9JIH2 Gm9870-201ENSMUST00000063874 645 ntBASIC21.19■□□□□ 0.98
Nup50Q9JIH2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nup50Q9JIH2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nup50Q9JIH2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup50Q9JIH2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nup50Q9JIH2 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.18■□□□□ 0.98
Nup50Q9JIH2 Gm43530-201ENSMUST00000195920 274 ntBASIC21.18■□□□□ 0.98
Nup50Q9JIH2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup50Q9JIH2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Nup50Q9JIH2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup50Q9JIH2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nup50Q9JIH2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nup50Q9JIH2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nup50Q9JIH2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.17■□□□□ 0.98
Nup50Q9JIH2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nup50Q9JIH2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Nup50Q9JIH2 Gm15820-201ENSMUST00000201566 728 ntBASIC21.17■□□□□ 0.98
Nup50Q9JIH2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nup50Q9JIH2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nup50Q9JIH2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.17■□□□□ 0.98
Nup50Q9JIH2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nup50Q9JIH2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nup50Q9JIH2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup50Q9JIH2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nup50Q9JIH2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.16■□□□□ 0.98
Nup50Q9JIH2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nup50Q9JIH2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup50Q9JIH2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Nup50Q9JIH2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup50Q9JIH2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.16■□□□□ 0.98
Nup50Q9JIH2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Nup50Q9JIH2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nup50Q9JIH2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Nup50Q9JIH2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup50Q9JIH2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.15■□□□□ 0.98
Nup50Q9JIH2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup50Q9JIH2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup50Q9JIH2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup50Q9JIH2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nup50Q9JIH2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nup50Q9JIH2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.14■□□□□ 0.97
Nup50Q9JIH2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nup50Q9JIH2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Nup50Q9JIH2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nup50Q9JIH2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nup50Q9JIH2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nup50Q9JIH2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nup50Q9JIH2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Nup50Q9JIH2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nup50Q9JIH2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nup50Q9JIH2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup50Q9JIH2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup50Q9JIH2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Nup50Q9JIH2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nup50Q9JIH2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.13■□□□□ 0.97
Nup50Q9JIH2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Nup50Q9JIH2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup50Q9JIH2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup50Q9JIH2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nup50Q9JIH2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nup50Q9JIH2 Mir6236-201ENSMUST00000184437 123 ntBASIC21.12■□□□□ 0.97
Nup50Q9JIH2 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.12■□□□□ 0.97
Nup50Q9JIH2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nup50Q9JIH2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nup50Q9JIH2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Nup50Q9JIH2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nup50Q9JIH2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup50Q9JIH2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Nup50Q9JIH2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nup50Q9JIH2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nup50Q9JIH2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup50Q9JIH2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nup50Q9JIH2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Nup50Q9JIH2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Nup50Q9JIH2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup50Q9JIH2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
Nup50Q9JIH2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup50Q9JIH2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
Nup50Q9JIH2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup50Q9JIH2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup50Q9JIH2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nup50Q9JIH2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup50Q9JIH2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.09■□□□□ 0.97
Nup50Q9JIH2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nup50Q9JIH2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Nup50Q9JIH2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup50Q9JIH2 Gm7417-201ENSMUST00000192950 473 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms