Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim39Q9ESN2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim39Q9ESN2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim39Q9ESN2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim39Q9ESN2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim39Q9ESN2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim39Q9ESN2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim39Q9ESN2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim39Q9ESN2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim39Q9ESN2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim39Q9ESN2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim39Q9ESN2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim39Q9ESN2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
Trim39Q9ESN2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim39Q9ESN2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim39Q9ESN2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trim39Q9ESN2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim39Q9ESN2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim39Q9ESN2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim39Q9ESN2 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.51■□□□□ 0.55
Trim39Q9ESN2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim39Q9ESN2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim39Q9ESN2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim39Q9ESN2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim39Q9ESN2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim39Q9ESN2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim39Q9ESN2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trim39Q9ESN2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
Trim39Q9ESN2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim39Q9ESN2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim39Q9ESN2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim39Q9ESN2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim39Q9ESN2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim39Q9ESN2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim39Q9ESN2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim39Q9ESN2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim39Q9ESN2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim39Q9ESN2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim39Q9ESN2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trim39Q9ESN2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim39Q9ESN2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim39Q9ESN2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim39Q9ESN2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim39Q9ESN2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim39Q9ESN2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim39Q9ESN2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trim39Q9ESN2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.48■□□□□ 0.55
Trim39Q9ESN2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.48■□□□□ 0.55
Trim39Q9ESN2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim39Q9ESN2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.48■□□□□ 0.55
Trim39Q9ESN2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim39Q9ESN2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim39Q9ESN2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim39Q9ESN2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim39Q9ESN2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.47■□□□□ 0.55
Trim39Q9ESN2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim39Q9ESN2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.47■□□□□ 0.55
Trim39Q9ESN2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.47■□□□□ 0.55
Trim39Q9ESN2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim39Q9ESN2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim39Q9ESN2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim39Q9ESN2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim39Q9ESN2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim39Q9ESN2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim39Q9ESN2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim39Q9ESN2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.46■□□□□ 0.55
Trim39Q9ESN2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim39Q9ESN2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim39Q9ESN2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trim39Q9ESN2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim39Q9ESN2 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.45■□□□□ 0.54
Trim39Q9ESN2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim39Q9ESN2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim39Q9ESN2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim39Q9ESN2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim39Q9ESN2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim39Q9ESN2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim39Q9ESN2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim39Q9ESN2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.44■□□□□ 0.54
Trim39Q9ESN2 Etf1-202ENSMUST00000180351 108 ntBASIC18.44■□□□□ 0.54
Trim39Q9ESN2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim39Q9ESN2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim39Q9ESN2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trim39Q9ESN2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 116.1 ms