Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssmem1Q9D9Y8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ssmem1Q9D9Y8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.29■□□□□ 0.36
Ssmem1Q9D9Y8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssmem1Q9D9Y8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssmem1Q9D9Y8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ssmem1Q9D9Y8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssmem1Q9D9Y8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssmem1Q9D9Y8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssmem1Q9D9Y8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssmem1Q9D9Y8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ssmem1Q9D9Y8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ssmem1Q9D9Y8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssmem1Q9D9Y8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ssmem1Q9D9Y8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ssmem1Q9D9Y8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssmem1Q9D9Y8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssmem1Q9D9Y8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssmem1Q9D9Y8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssmem1Q9D9Y8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssmem1Q9D9Y8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ssmem1Q9D9Y8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ssmem1Q9D9Y8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ssmem1Q9D9Y8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ssmem1Q9D9Y8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ssmem1Q9D9Y8 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.27■□□□□ 0.35
Ssmem1Q9D9Y8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ssmem1Q9D9Y8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ssmem1Q9D9Y8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ssmem1Q9D9Y8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ssmem1Q9D9Y8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ssmem1Q9D9Y8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ssmem1Q9D9Y8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ssmem1Q9D9Y8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssmem1Q9D9Y8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ssmem1Q9D9Y8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ssmem1Q9D9Y8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssmem1Q9D9Y8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.26■□□□□ 0.35
Ssmem1Q9D9Y8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Ssmem1Q9D9Y8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ssmem1Q9D9Y8 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.26■□□□□ 0.35
Ssmem1Q9D9Y8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssmem1Q9D9Y8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssmem1Q9D9Y8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ssmem1Q9D9Y8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.26■□□□□ 0.35
Ssmem1Q9D9Y8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Ssmem1Q9D9Y8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssmem1Q9D9Y8 Gm15039-201ENSMUST00000118914 875 ntBASIC17.25■□□□□ 0.35
Ssmem1Q9D9Y8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.25■□□□□ 0.35
Ssmem1Q9D9Y8 Mir7075-201ENSMUST00000184187 82 ntBASIC17.25■□□□□ 0.35
Ssmem1Q9D9Y8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.25■□□□□ 0.35
Ssmem1Q9D9Y8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssmem1Q9D9Y8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssmem1Q9D9Y8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssmem1Q9D9Y8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssmem1Q9D9Y8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssmem1Q9D9Y8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ssmem1Q9D9Y8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssmem1Q9D9Y8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssmem1Q9D9Y8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssmem1Q9D9Y8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssmem1Q9D9Y8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssmem1Q9D9Y8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Ssmem1Q9D9Y8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssmem1Q9D9Y8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Ssmem1Q9D9Y8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssmem1Q9D9Y8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssmem1Q9D9Y8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.23■□□□□ 0.35
Ssmem1Q9D9Y8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssmem1Q9D9Y8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssmem1Q9D9Y8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ssmem1Q9D9Y8 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.23■□□□□ 0.35
Ssmem1Q9D9Y8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssmem1Q9D9Y8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ssmem1Q9D9Y8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssmem1Q9D9Y8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ssmem1Q9D9Y8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssmem1Q9D9Y8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssmem1Q9D9Y8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssmem1Q9D9Y8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssmem1Q9D9Y8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ssmem1Q9D9Y8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssmem1Q9D9Y8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssmem1Q9D9Y8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssmem1Q9D9Y8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ssmem1Q9D9Y8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssmem1Q9D9Y8 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.21■□□□□ 0.35
Ssmem1Q9D9Y8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ssmem1Q9D9Y8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssmem1Q9D9Y8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ssmem1Q9D9Y8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssmem1Q9D9Y8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssmem1Q9D9Y8 Gm6139-201ENSMUST00000079261 882 ntBASIC17.21■□□□□ 0.35
Ssmem1Q9D9Y8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssmem1Q9D9Y8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ssmem1Q9D9Y8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ssmem1Q9D9Y8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ssmem1Q9D9Y8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
Ssmem1Q9D9Y8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssmem1Q9D9Y8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms