Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
U2af1Q9D883 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
U2af1Q9D883 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
U2af1Q9D883 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC26.4■■□□□ 1.82
U2af1Q9D883 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
U2af1Q9D883 Gm7160-202ENSMUST00000188519 1027 ntBASIC26.4■■□□□ 1.82
U2af1Q9D883 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
U2af1Q9D883 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
U2af1Q9D883 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
U2af1Q9D883 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
U2af1Q9D883 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
U2af1Q9D883 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
U2af1Q9D883 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
U2af1Q9D883 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC26.39■■□□□ 1.82
U2af1Q9D883 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
U2af1Q9D883 Gm43017-201ENSMUST00000198296 752 ntBASIC26.39■■□□□ 1.82
U2af1Q9D883 Gm43173-201ENSMUST00000202246 593 ntBASIC26.39■■□□□ 1.82
U2af1Q9D883 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
U2af1Q9D883 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
U2af1Q9D883 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
U2af1Q9D883 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
U2af1Q9D883 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
U2af1Q9D883 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
U2af1Q9D883 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
U2af1Q9D883 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
U2af1Q9D883 Flvcr1-202ENSMUST00000191946 1216 ntBASIC26.38■■□□□ 1.81
U2af1Q9D883 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
U2af1Q9D883 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
U2af1Q9D883 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC26.38■■□□□ 1.81
U2af1Q9D883 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
U2af1Q9D883 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
U2af1Q9D883 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
U2af1Q9D883 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
U2af1Q9D883 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
U2af1Q9D883 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
U2af1Q9D883 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC26.37■■□□□ 1.81
U2af1Q9D883 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
U2af1Q9D883 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC26.37■■□□□ 1.81
U2af1Q9D883 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
U2af1Q9D883 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC26.37■■□□□ 1.81
U2af1Q9D883 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
U2af1Q9D883 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
U2af1Q9D883 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
U2af1Q9D883 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
U2af1Q9D883 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC26.36■■□□□ 1.81
U2af1Q9D883 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC26.36■■□□□ 1.81
U2af1Q9D883 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
U2af1Q9D883 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
U2af1Q9D883 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
U2af1Q9D883 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
U2af1Q9D883 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
U2af1Q9D883 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
U2af1Q9D883 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
U2af1Q9D883 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
U2af1Q9D883 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
U2af1Q9D883 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
U2af1Q9D883 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC26.35■■□□□ 1.81
U2af1Q9D883 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC26.35■■□□□ 1.81
U2af1Q9D883 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
U2af1Q9D883 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
U2af1Q9D883 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
U2af1Q9D883 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
U2af1Q9D883 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC26.34■■□□□ 1.81
U2af1Q9D883 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
U2af1Q9D883 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
U2af1Q9D883 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
U2af1Q9D883 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
U2af1Q9D883 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
U2af1Q9D883 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
U2af1Q9D883 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
U2af1Q9D883 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC26.33■■□□□ 1.81
U2af1Q9D883 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC26.33■■□□□ 1.81
U2af1Q9D883 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
U2af1Q9D883 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
U2af1Q9D883 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
U2af1Q9D883 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC26.32■■□□□ 1.8
U2af1Q9D883 Gm2011-201ENSMUST00000203124 1263 ntBASIC26.32■■□□□ 1.8
U2af1Q9D883 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
U2af1Q9D883 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
U2af1Q9D883 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
U2af1Q9D883 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
U2af1Q9D883 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
U2af1Q9D883 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
U2af1Q9D883 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
U2af1Q9D883 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC26.31■■□□□ 1.8
U2af1Q9D883 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC26.31■■□□□ 1.8
U2af1Q9D883 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC26.31■■□□□ 1.8
U2af1Q9D883 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
U2af1Q9D883 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
U2af1Q9D883 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
U2af1Q9D883 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC26.3■■□□□ 1.8
U2af1Q9D883 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
U2af1Q9D883 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
U2af1Q9D883 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
U2af1Q9D883 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
U2af1Q9D883 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
U2af1Q9D883 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
U2af1Q9D883 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
U2af1Q9D883 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
U2af1Q9D883 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms