Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Sh2d4aQ9D7V1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2d4aQ9D7V1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2d4aQ9D7V1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2d4aQ9D7V1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Sh2d4aQ9D7V1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4aQ9D7V1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4aQ9D7V1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4aQ9D7V1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4aQ9D7V1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4aQ9D7V1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4aQ9D7V1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sh2d4aQ9D7V1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4aQ9D7V1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4aQ9D7V1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh2d4aQ9D7V1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh2d4aQ9D7V1 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.3■□□□□ 0.68
Sh2d4aQ9D7V1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sh2d4aQ9D7V1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sh2d4aQ9D7V1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Sh2d4aQ9D7V1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh2d4aQ9D7V1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh2d4aQ9D7V1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.3■□□□□ 0.68
Sh2d4aQ9D7V1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh2d4aQ9D7V1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh2d4aQ9D7V1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sh2d4aQ9D7V1 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.29■□□□□ 0.68
Sh2d4aQ9D7V1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4aQ9D7V1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4aQ9D7V1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4aQ9D7V1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.29■□□□□ 0.68
Sh2d4aQ9D7V1 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.29■□□□□ 0.68
Sh2d4aQ9D7V1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4aQ9D7V1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4aQ9D7V1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4aQ9D7V1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4aQ9D7V1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4aQ9D7V1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4aQ9D7V1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4aQ9D7V1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4aQ9D7V1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4aQ9D7V1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4aQ9D7V1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.28■□□□□ 0.68
Sh2d4aQ9D7V1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4aQ9D7V1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.28■□□□□ 0.68
Sh2d4aQ9D7V1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.28■□□□□ 0.68
Sh2d4aQ9D7V1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4aQ9D7V1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4aQ9D7V1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4aQ9D7V1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4aQ9D7V1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4aQ9D7V1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4aQ9D7V1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2d4aQ9D7V1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2d4aQ9D7V1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sh2d4aQ9D7V1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2d4aQ9D7V1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.27■□□□□ 0.68
Sh2d4aQ9D7V1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2d4aQ9D7V1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.27■□□□□ 0.68
Sh2d4aQ9D7V1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sh2d4aQ9D7V1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sh2d4aQ9D7V1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Sh2d4aQ9D7V1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sh2d4aQ9D7V1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.27■□□□□ 0.67
Sh2d4aQ9D7V1 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.26■□□□□ 0.67
Sh2d4aQ9D7V1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d4aQ9D7V1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d4aQ9D7V1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d4aQ9D7V1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Sh2d4aQ9D7V1 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.26■□□□□ 0.67
Sh2d4aQ9D7V1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d4aQ9D7V1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4aQ9D7V1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sh2d4aQ9D7V1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Sh2d4aQ9D7V1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4aQ9D7V1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sh2d4aQ9D7V1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.25■□□□□ 0.67
Sh2d4aQ9D7V1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.25■□□□□ 0.67
Sh2d4aQ9D7V1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Sh2d4aQ9D7V1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Sh2d4aQ9D7V1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4aQ9D7V1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Sh2d4aQ9D7V1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4aQ9D7V1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.24■□□□□ 0.67
Sh2d4aQ9D7V1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4aQ9D7V1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4aQ9D7V1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4aQ9D7V1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4aQ9D7V1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4aQ9D7V1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4aQ9D7V1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d4aQ9D7V1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Sh2d4aQ9D7V1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d4aQ9D7V1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d4aQ9D7V1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.23■□□□□ 0.67
Sh2d4aQ9D7V1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d4aQ9D7V1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d4aQ9D7V1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d4aQ9D7V1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d4aQ9D7V1 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms