Protein–RNA interactions for Protein: Q9D236

Htra3, Serine protease HTRA3, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra3Q9D236 Gm9987-201ENSMUST00000069768 567 ntBASIC21.91■■□□□ 1.1
Htra3Q9D236 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Htra3Q9D236 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Htra3Q9D236 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Htra3Q9D236 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Htra3Q9D236 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Htra3Q9D236 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Htra3Q9D236 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
Htra3Q9D236 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.9■■□□□ 1.1
Htra3Q9D236 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Htra3Q9D236 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.9■■□□□ 1.1
Htra3Q9D236 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Htra3Q9D236 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.9■■□□□ 1.1
Htra3Q9D236 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Htra3Q9D236 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Htra3Q9D236 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Htra3Q9D236 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Htra3Q9D236 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Htra3Q9D236 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.89■■□□□ 1.09
Htra3Q9D236 Gm6211-202ENSMUST00000167849 925 ntBASIC21.89■■□□□ 1.09
Htra3Q9D236 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.89■■□□□ 1.09
Htra3Q9D236 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Htra3Q9D236 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Htra3Q9D236 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Htra3Q9D236 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Htra3Q9D236 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Htra3Q9D236 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Htra3Q9D236 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Htra3Q9D236 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.88■■□□□ 1.09
Htra3Q9D236 Gm21362-201ENSMUST00000194272 928 ntBASIC21.88■■□□□ 1.09
Htra3Q9D236 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.88■■□□□ 1.09
Htra3Q9D236 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Htra3Q9D236 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Htra3Q9D236 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Htra3Q9D236 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.87■■□□□ 1.09
Htra3Q9D236 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Htra3Q9D236 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Htra3Q9D236 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Htra3Q9D236 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Htra3Q9D236 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Htra3Q9D236 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.86■■□□□ 1.09
Htra3Q9D236 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.86■■□□□ 1.09
Htra3Q9D236 Gm6420-201ENSMUST00000193885 723 ntBASIC21.86■■□□□ 1.09
Htra3Q9D236 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Htra3Q9D236 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Htra3Q9D236 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Htra3Q9D236 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.85■■□□□ 1.09
Htra3Q9D236 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Htra3Q9D236 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Htra3Q9D236 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
Htra3Q9D236 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Htra3Q9D236 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.85■■□□□ 1.09
Htra3Q9D236 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Htra3Q9D236 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
Htra3Q9D236 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Htra3Q9D236 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Htra3Q9D236 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Htra3Q9D236 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Htra3Q9D236 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Htra3Q9D236 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.84■■□□□ 1.09
Htra3Q9D236 Gm27741-201ENSMUST00000185060 237 ntBASIC21.84■■□□□ 1.09
Htra3Q9D236 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.84■■□□□ 1.09
Htra3Q9D236 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Htra3Q9D236 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Htra3Q9D236 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Htra3Q9D236 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Htra3Q9D236 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Htra3Q9D236 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Htra3Q9D236 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Htra3Q9D236 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC21.83■■□□□ 1.09
Htra3Q9D236 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.83■■□□□ 1.09
Htra3Q9D236 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.83■■□□□ 1.09
Htra3Q9D236 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Htra3Q9D236 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Htra3Q9D236 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Htra3Q9D236 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Htra3Q9D236 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Htra3Q9D236 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
Htra3Q9D236 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Htra3Q9D236 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Htra3Q9D236 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Htra3Q9D236 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Htra3Q9D236 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Htra3Q9D236 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Htra3Q9D236 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Htra3Q9D236 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Htra3Q9D236 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Htra3Q9D236 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Htra3Q9D236 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.81■■□□□ 1.08
Htra3Q9D236 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Htra3Q9D236 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Htra3Q9D236 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Htra3Q9D236 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.8■■□□□ 1.08
Htra3Q9D236 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Htra3Q9D236 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.8■■□□□ 1.08
Htra3Q9D236 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Htra3Q9D236 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Htra3Q9D236 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.8■■□□□ 1.08
Htra3Q9D236 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Htra3Q9D236 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms