Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssu72Q9CY97 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Ssu72Q9CY97 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.93■□□□□ 0.78
Ssu72Q9CY97 Gm12366-201ENSMUST00000121722 873 ntBASIC19.93■□□□□ 0.78
Ssu72Q9CY97 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.93■□□□□ 0.78
Ssu72Q9CY97 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ssu72Q9CY97 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssu72Q9CY97 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.93■□□□□ 0.78
Ssu72Q9CY97 Gm5786-201ENSMUST00000085368 882 ntBASIC19.93■□□□□ 0.78
Ssu72Q9CY97 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssu72Q9CY97 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssu72Q9CY97 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.93■□□□□ 0.78
Ssu72Q9CY97 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssu72Q9CY97 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssu72Q9CY97 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ssu72Q9CY97 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ssu72Q9CY97 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Ssu72Q9CY97 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssu72Q9CY97 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssu72Q9CY97 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ssu72Q9CY97 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ssu72Q9CY97 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssu72Q9CY97 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssu72Q9CY97 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssu72Q9CY97 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssu72Q9CY97 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ssu72Q9CY97 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ssu72Q9CY97 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ssu72Q9CY97 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.91■□□□□ 0.78
Ssu72Q9CY97 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ssu72Q9CY97 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssu72Q9CY97 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssu72Q9CY97 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ssu72Q9CY97 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssu72Q9CY97 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssu72Q9CY97 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssu72Q9CY97 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ssu72Q9CY97 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssu72Q9CY97 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ssu72Q9CY97 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssu72Q9CY97 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssu72Q9CY97 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.9■□□□□ 0.78
Ssu72Q9CY97 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ssu72Q9CY97 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ssu72Q9CY97 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ssu72Q9CY97 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ssu72Q9CY97 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ssu72Q9CY97 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssu72Q9CY97 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ssu72Q9CY97 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssu72Q9CY97 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssu72Q9CY97 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ssu72Q9CY97 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssu72Q9CY97 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ssu72Q9CY97 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssu72Q9CY97 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ssu72Q9CY97 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssu72Q9CY97 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssu72Q9CY97 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssu72Q9CY97 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ssu72Q9CY97 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssu72Q9CY97 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssu72Q9CY97 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ssu72Q9CY97 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.87■□□□□ 0.77
Ssu72Q9CY97 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ssu72Q9CY97 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssu72Q9CY97 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ssu72Q9CY97 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssu72Q9CY97 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ssu72Q9CY97 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssu72Q9CY97 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssu72Q9CY97 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ssu72Q9CY97 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ssu72Q9CY97 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ssu72Q9CY97 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ssu72Q9CY97 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssu72Q9CY97 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssu72Q9CY97 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssu72Q9CY97 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.85■□□□□ 0.77
Ssu72Q9CY97 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.85■□□□□ 0.77
Ssu72Q9CY97 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssu72Q9CY97 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssu72Q9CY97 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Ssu72Q9CY97 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.85■□□□□ 0.77
Ssu72Q9CY97 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ssu72Q9CY97 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ssu72Q9CY97 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssu72Q9CY97 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssu72Q9CY97 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ssu72Q9CY97 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssu72Q9CY97 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ssu72Q9CY97 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssu72Q9CY97 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssu72Q9CY97 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssu72Q9CY97 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Ssu72Q9CY97 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ssu72Q9CY97 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.83■□□□□ 0.77
Ssu72Q9CY97 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Ssu72Q9CY97 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.83■□□□□ 0.76
Ssu72Q9CY97 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms