Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssr1Q9CY50 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Ssr1Q9CY50 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssr1Q9CY50 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ssr1Q9CY50 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.55■■□□□ 1.04
Ssr1Q9CY50 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ssr1Q9CY50 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ssr1Q9CY50 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ssr1Q9CY50 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ssr1Q9CY50 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ssr1Q9CY50 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ssr1Q9CY50 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.54■■□□□ 1.04
Ssr1Q9CY50 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ssr1Q9CY50 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.54■■□□□ 1.04
Ssr1Q9CY50 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Ssr1Q9CY50 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssr1Q9CY50 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ssr1Q9CY50 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssr1Q9CY50 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ssr1Q9CY50 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssr1Q9CY50 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssr1Q9CY50 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssr1Q9CY50 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ssr1Q9CY50 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ssr1Q9CY50 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ssr1Q9CY50 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ssr1Q9CY50 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ssr1Q9CY50 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ssr1Q9CY50 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ssr1Q9CY50 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.51■■□□□ 1.03
Ssr1Q9CY50 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ssr1Q9CY50 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.51■■□□□ 1.03
Ssr1Q9CY50 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ssr1Q9CY50 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ssr1Q9CY50 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ssr1Q9CY50 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ssr1Q9CY50 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Ssr1Q9CY50 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ssr1Q9CY50 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Ssr1Q9CY50 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.5■■□□□ 1.03
Ssr1Q9CY50 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.5■■□□□ 1.03
Ssr1Q9CY50 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ssr1Q9CY50 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ssr1Q9CY50 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Ssr1Q9CY50 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ssr1Q9CY50 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ssr1Q9CY50 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ssr1Q9CY50 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ssr1Q9CY50 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ssr1Q9CY50 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ssr1Q9CY50 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ssr1Q9CY50 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.48■■□□□ 1.03
Ssr1Q9CY50 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.48■■□□□ 1.03
Ssr1Q9CY50 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ssr1Q9CY50 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ssr1Q9CY50 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ssr1Q9CY50 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ssr1Q9CY50 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssr1Q9CY50 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssr1Q9CY50 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssr1Q9CY50 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssr1Q9CY50 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssr1Q9CY50 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssr1Q9CY50 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ssr1Q9CY50 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssr1Q9CY50 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssr1Q9CY50 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC21.47■■□□□ 1.03
Ssr1Q9CY50 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssr1Q9CY50 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssr1Q9CY50 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssr1Q9CY50 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.46■■□□□ 1.03
Ssr1Q9CY50 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.46■■□□□ 1.03
Ssr1Q9CY50 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ssr1Q9CY50 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ssr1Q9CY50 Gm15820-201ENSMUST00000201566 728 ntBASIC21.46■■□□□ 1.03
Ssr1Q9CY50 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ssr1Q9CY50 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ssr1Q9CY50 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ssr1Q9CY50 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ssr1Q9CY50 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ssr1Q9CY50 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.45■■□□□ 1.03
Ssr1Q9CY50 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.45■■□□□ 1.02
Ssr1Q9CY50 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.45■■□□□ 1.02
Ssr1Q9CY50 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ssr1Q9CY50 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ssr1Q9CY50 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ssr1Q9CY50 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
Ssr1Q9CY50 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ssr1Q9CY50 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ssr1Q9CY50 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.44■■□□□ 1.02
Ssr1Q9CY50 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ssr1Q9CY50 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.44■■□□□ 1.02
Ssr1Q9CY50 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.44■■□□□ 1.02
Ssr1Q9CY50 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.44■■□□□ 1.02
Ssr1Q9CY50 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.44■■□□□ 1.02
Ssr1Q9CY50 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ssr1Q9CY50 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ssr1Q9CY50 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.44■■□□□ 1.02
Ssr1Q9CY50 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ssr1Q9CY50 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms