Protein–RNA interactions for Protein: Q9CXS0

3110018I06Rik, RIKEN cDNA 3110018I06 gene, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3110018I06RikQ9CXS0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
3110018I06RikQ9CXS0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Golgb1-201ENSMUST00000023534 498 ntBASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Gm9847-201ENSMUST00000052528 599 ntBASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
3110018I06RikQ9CXS0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
3110018I06RikQ9CXS0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
3110018I06RikQ9CXS0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.28■□□□□ 0.04
3110018I06RikQ9CXS0 Gm12922-201ENSMUST00000120626 809 ntBASIC15.28■□□□□ 0.04
3110018I06RikQ9CXS0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
3110018I06RikQ9CXS0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
3110018I06RikQ9CXS0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
3110018I06RikQ9CXS0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
3110018I06RikQ9CXS0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
3110018I06RikQ9CXS0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
3110018I06RikQ9CXS0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
3110018I06RikQ9CXS0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
3110018I06RikQ9CXS0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
3110018I06RikQ9CXS0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
3110018I06RikQ9CXS0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
3110018I06RikQ9CXS0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
3110018I06RikQ9CXS0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
3110018I06RikQ9CXS0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
3110018I06RikQ9CXS0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
3110018I06RikQ9CXS0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
3110018I06RikQ9CXS0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
3110018I06RikQ9CXS0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
3110018I06RikQ9CXS0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
3110018I06RikQ9CXS0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
3110018I06RikQ9CXS0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
3110018I06RikQ9CXS0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
3110018I06RikQ9CXS0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.27■□□□□ 0.03
3110018I06RikQ9CXS0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
3110018I06RikQ9CXS0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
3110018I06RikQ9CXS0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
3110018I06RikQ9CXS0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
3110018I06RikQ9CXS0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
3110018I06RikQ9CXS0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.26■□□□□ 0.03
3110018I06RikQ9CXS0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.26■□□□□ 0.03
3110018I06RikQ9CXS0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
3110018I06RikQ9CXS0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
3110018I06RikQ9CXS0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
3110018I06RikQ9CXS0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.26■□□□□ 0.03
3110018I06RikQ9CXS0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
3110018I06RikQ9CXS0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
3110018I06RikQ9CXS0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
3110018I06RikQ9CXS0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
3110018I06RikQ9CXS0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
3110018I06RikQ9CXS0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
3110018I06RikQ9CXS0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.25■□□□□ 0.03
3110018I06RikQ9CXS0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
3110018I06RikQ9CXS0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
3110018I06RikQ9CXS0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
3110018I06RikQ9CXS0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.25■□□□□ 0.03
3110018I06RikQ9CXS0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
3110018I06RikQ9CXS0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
3110018I06RikQ9CXS0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
3110018I06RikQ9CXS0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
3110018I06RikQ9CXS0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
3110018I06RikQ9CXS0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
3110018I06RikQ9CXS0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
3110018I06RikQ9CXS0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
3110018I06RikQ9CXS0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
3110018I06RikQ9CXS0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
3110018I06RikQ9CXS0 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.24■□□□□ 0.03
3110018I06RikQ9CXS0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.24■□□□□ 0.03
3110018I06RikQ9CXS0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.24■□□□□ 0.03
3110018I06RikQ9CXS0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.24■□□□□ 0.03
3110018I06RikQ9CXS0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
3110018I06RikQ9CXS0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
3110018I06RikQ9CXS0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
3110018I06RikQ9CXS0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
3110018I06RikQ9CXS0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
3110018I06RikQ9CXS0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
3110018I06RikQ9CXS0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
3110018I06RikQ9CXS0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
3110018I06RikQ9CXS0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
3110018I06RikQ9CXS0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
3110018I06RikQ9CXS0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
3110018I06RikQ9CXS0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.23■□□□□ 0.03
3110018I06RikQ9CXS0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
3110018I06RikQ9CXS0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
3110018I06RikQ9CXS0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
3110018I06RikQ9CXS0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
3110018I06RikQ9CXS0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms