Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim8Q99PJ2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim8Q99PJ2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trim8Q99PJ2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trim8Q99PJ2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.58■□□□□ 0.73
Trim8Q99PJ2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Trim8Q99PJ2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim8Q99PJ2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim8Q99PJ2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.58■□□□□ 0.72
Trim8Q99PJ2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim8Q99PJ2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim8Q99PJ2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim8Q99PJ2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim8Q99PJ2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim8Q99PJ2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim8Q99PJ2 Gm13238-201ENSMUST00000117655 780 ntBASIC19.57■□□□□ 0.72
Trim8Q99PJ2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.57■□□□□ 0.72
Trim8Q99PJ2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.57■□□□□ 0.72
Trim8Q99PJ2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.57■□□□□ 0.72
Trim8Q99PJ2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim8Q99PJ2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim8Q99PJ2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim8Q99PJ2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
Trim8Q99PJ2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim8Q99PJ2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim8Q99PJ2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Trim8Q99PJ2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim8Q99PJ2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim8Q99PJ2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim8Q99PJ2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim8Q99PJ2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim8Q99PJ2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim8Q99PJ2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim8Q99PJ2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim8Q99PJ2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim8Q99PJ2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim8Q99PJ2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim8Q99PJ2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim8Q99PJ2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim8Q99PJ2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.55■□□□□ 0.72
Trim8Q99PJ2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.55■□□□□ 0.72
Trim8Q99PJ2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim8Q99PJ2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim8Q99PJ2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim8Q99PJ2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim8Q99PJ2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim8Q99PJ2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim8Q99PJ2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim8Q99PJ2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Trim8Q99PJ2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim8Q99PJ2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trim8Q99PJ2 Gm45444-201ENSMUST00000211394 898 ntBASIC19.54■□□□□ 0.72
Trim8Q99PJ2 Gm5921-201ENSMUST00000075898 882 ntBASIC19.54■□□□□ 0.72
Trim8Q99PJ2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim8Q99PJ2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim8Q99PJ2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim8Q99PJ2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim8Q99PJ2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim8Q99PJ2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim8Q99PJ2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim8Q99PJ2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim8Q99PJ2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim8Q99PJ2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim8Q99PJ2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim8Q99PJ2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Trim8Q99PJ2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim8Q99PJ2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim8Q99PJ2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim8Q99PJ2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim8Q99PJ2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim8Q99PJ2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim8Q99PJ2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim8Q99PJ2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.52■□□□□ 0.72
Trim8Q99PJ2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim8Q99PJ2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim8Q99PJ2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Trim8Q99PJ2 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.51■□□□□ 0.71
Trim8Q99PJ2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim8Q99PJ2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim8Q99PJ2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim8Q99PJ2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim8Q99PJ2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim8Q99PJ2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.5■□□□□ 0.71
Trim8Q99PJ2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim8Q99PJ2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim8Q99PJ2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.5■□□□□ 0.71
Trim8Q99PJ2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim8Q99PJ2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim8Q99PJ2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim8Q99PJ2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim8Q99PJ2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim8Q99PJ2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim8Q99PJ2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim8Q99PJ2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim8Q99PJ2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trim8Q99PJ2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim8Q99PJ2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim8Q99PJ2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim8Q99PJ2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Trim8Q99PJ2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms