Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh23Q99PF4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh23Q99PF4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh23Q99PF4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh23Q99PF4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh23Q99PF4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.84■□□□□ 0.93
Cdh23Q99PF4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cdh23Q99PF4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh23Q99PF4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh23Q99PF4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh23Q99PF4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.83■□□□□ 0.93
Cdh23Q99PF4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.83■□□□□ 0.93
Cdh23Q99PF4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh23Q99PF4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh23Q99PF4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh23Q99PF4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.83■□□□□ 0.93
Cdh23Q99PF4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
Cdh23Q99PF4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cdh23Q99PF4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdh23Q99PF4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh23Q99PF4 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.82■□□□□ 0.92
Cdh23Q99PF4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh23Q99PF4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh23Q99PF4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh23Q99PF4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh23Q99PF4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.81■□□□□ 0.92
Cdh23Q99PF4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh23Q99PF4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh23Q99PF4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh23Q99PF4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh23Q99PF4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh23Q99PF4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh23Q99PF4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh23Q99PF4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cdh23Q99PF4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh23Q99PF4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh23Q99PF4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cdh23Q99PF4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.8■□□□□ 0.92
Cdh23Q99PF4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cdh23Q99PF4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cdh23Q99PF4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cdh23Q99PF4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh23Q99PF4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh23Q99PF4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh23Q99PF4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cdh23Q99PF4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh23Q99PF4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.79■□□□□ 0.92
Cdh23Q99PF4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh23Q99PF4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh23Q99PF4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh23Q99PF4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.79■□□□□ 0.92
Cdh23Q99PF4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Cdh23Q99PF4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh23Q99PF4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh23Q99PF4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.79■□□□□ 0.92
Cdh23Q99PF4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh23Q99PF4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cdh23Q99PF4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cdh23Q99PF4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh23Q99PF4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cdh23Q99PF4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cdh23Q99PF4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cdh23Q99PF4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh23Q99PF4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh23Q99PF4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh23Q99PF4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh23Q99PF4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh23Q99PF4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh23Q99PF4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh23Q99PF4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh23Q99PF4 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.77■□□□□ 0.92
Cdh23Q99PF4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh23Q99PF4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh23Q99PF4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh23Q99PF4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh23Q99PF4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh23Q99PF4 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.77■□□□□ 0.92
Cdh23Q99PF4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh23Q99PF4 Gm10812-201ENSMUST00000099864 546 ntBASIC20.77■□□□□ 0.91
Cdh23Q99PF4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cdh23Q99PF4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh23Q99PF4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh23Q99PF4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh23Q99PF4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Cdh23Q99PF4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Cdh23Q99PF4 Gm9988-201ENSMUST00000069786 435 ntBASIC20.76■□□□□ 0.91
Cdh23Q99PF4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh23Q99PF4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Cdh23Q99PF4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh23Q99PF4 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.75■□□□□ 0.91
Cdh23Q99PF4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.75■□□□□ 0.91
Cdh23Q99PF4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.75■□□□□ 0.91
Cdh23Q99PF4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Cdh23Q99PF4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh23Q99PF4 Gm13836-201ENSMUST00000121159 501 ntBASIC20.74■□□□□ 0.91
Cdh23Q99PF4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.74■□□□□ 0.91
Cdh23Q99PF4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh23Q99PF4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh23Q99PF4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh23Q99PF4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms