Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha3Q91Y16 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha3Q91Y16 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha3Q91Y16 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha3Q91Y16 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Pcdha3Q91Y16 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.94■□□□□ 0.94
Pcdha3Q91Y16 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha3Q91Y16 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha3Q91Y16 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.94■□□□□ 0.94
Pcdha3Q91Y16 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha3Q91Y16 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha3Q91Y16 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha3Q91Y16 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha3Q91Y16 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.93■□□□□ 0.94
Pcdha3Q91Y16 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Pcdha3Q91Y16 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Pcdha3Q91Y16 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdha3Q91Y16 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.92■□□□□ 0.94
Pcdha3Q91Y16 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha3Q91Y16 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha3Q91Y16 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha3Q91Y16 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha3Q91Y16 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha3Q91Y16 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha3Q91Y16 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha3Q91Y16 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha3Q91Y16 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Pcdha3Q91Y16 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha3Q91Y16 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha3Q91Y16 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Pcdha3Q91Y16 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha3Q91Y16 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Pcdha3Q91Y16 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.9■□□□□ 0.94
Pcdha3Q91Y16 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha3Q91Y16 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha3Q91Y16 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pcdha3Q91Y16 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha3Q91Y16 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcdha3Q91Y16 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha3Q91Y16 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha3Q91Y16 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcdha3Q91Y16 Gm21956-201ENSMUST00000179946 522 ntBASIC20.9■□□□□ 0.94
Pcdha3Q91Y16 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha3Q91Y16 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha3Q91Y16 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdha3Q91Y16 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdha3Q91Y16 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha3Q91Y16 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.89■□□□□ 0.93
Pcdha3Q91Y16 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha3Q91Y16 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.89■□□□□ 0.93
Pcdha3Q91Y16 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.89■□□□□ 0.93
Pcdha3Q91Y16 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.89■□□□□ 0.93
Pcdha3Q91Y16 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha3Q91Y16 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha3Q91Y16 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.88■□□□□ 0.93
Pcdha3Q91Y16 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha3Q91Y16 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha3Q91Y16 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha3Q91Y16 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha3Q91Y16 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha3Q91Y16 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
Pcdha3Q91Y16 Gm43530-201ENSMUST00000195920 274 ntBASIC20.88■□□□□ 0.93
Pcdha3Q91Y16 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.88■□□□□ 0.93
Pcdha3Q91Y16 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha3Q91Y16 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha3Q91Y16 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha3Q91Y16 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha3Q91Y16 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha3Q91Y16 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha3Q91Y16 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha3Q91Y16 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha3Q91Y16 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha3Q91Y16 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha3Q91Y16 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha3Q91Y16 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Pcdha3Q91Y16 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha3Q91Y16 Gm12821-201ENSMUST00000120022 600 ntBASIC20.86■□□□□ 0.93
Pcdha3Q91Y16 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.86■□□□□ 0.93
Pcdha3Q91Y16 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha3Q91Y16 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdha3Q91Y16 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha3Q91Y16 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha3Q91Y16 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdha3Q91Y16 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha3Q91Y16 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha3Q91Y16 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.85■□□□□ 0.93
Pcdha3Q91Y16 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha3Q91Y16 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha3Q91Y16 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha3Q91Y16 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha3Q91Y16 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha3Q91Y16 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha3Q91Y16 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha3Q91Y16 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha3Q91Y16 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha3Q91Y16 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha3Q91Y16 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha3Q91Y16 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha3Q91Y16 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha3Q91Y16 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms