Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb20Q91XZ9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdhb20Q91XZ9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb20Q91XZ9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb20Q91XZ9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb20Q91XZ9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb20Q91XZ9 Spcs1-204ENSMUST00000226782 949 ntBASIC19.2■□□□□ 0.66
Pcdhb20Q91XZ9 Serp2-204ENSMUST00000228055 705 ntBASIC19.2■□□□□ 0.66
Pcdhb20Q91XZ9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb20Q91XZ9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhb20Q91XZ9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb20Q91XZ9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb20Q91XZ9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb20Q91XZ9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb20Q91XZ9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhb20Q91XZ9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb20Q91XZ9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb20Q91XZ9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb20Q91XZ9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.19■□□□□ 0.66
Pcdhb20Q91XZ9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.19■□□□□ 0.66
Pcdhb20Q91XZ9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb20Q91XZ9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb20Q91XZ9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb20Q91XZ9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb20Q91XZ9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdhb20Q91XZ9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhb20Q91XZ9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.18■□□□□ 0.66
Pcdhb20Q91XZ9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhb20Q91XZ9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb20Q91XZ9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb20Q91XZ9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhb20Q91XZ9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb20Q91XZ9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb20Q91XZ9 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.16■□□□□ 0.66
Pcdhb20Q91XZ9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb20Q91XZ9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb20Q91XZ9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Pcdhb20Q91XZ9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb20Q91XZ9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb20Q91XZ9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb20Q91XZ9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb20Q91XZ9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhb20Q91XZ9 Gm12251-201ENSMUST00000117893 792 ntBASIC19.15■□□□□ 0.66
Pcdhb20Q91XZ9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdhb20Q91XZ9 Gm43371-201ENSMUST00000202838 1031 ntBASIC19.15■□□□□ 0.66
Pcdhb20Q91XZ9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhb20Q91XZ9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Pcdhb20Q91XZ9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhb20Q91XZ9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb20Q91XZ9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb20Q91XZ9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.14■□□□□ 0.65
Pcdhb20Q91XZ9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb20Q91XZ9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb20Q91XZ9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.14■□□□□ 0.65
Pcdhb20Q91XZ9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.14■□□□□ 0.65
Pcdhb20Q91XZ9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pcdhb20Q91XZ9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb20Q91XZ9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb20Q91XZ9 Gm43017-201ENSMUST00000198296 752 ntBASIC19.13■□□□□ 0.65
Pcdhb20Q91XZ9 Gm43173-201ENSMUST00000202246 593 ntBASIC19.13■□□□□ 0.65
Pcdhb20Q91XZ9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb20Q91XZ9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb20Q91XZ9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Pcdhb20Q91XZ9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb20Q91XZ9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb20Q91XZ9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdhb20Q91XZ9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb20Q91XZ9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms