Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb4Q91XZ6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb4Q91XZ6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb4Q91XZ6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb4Q91XZ6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb4Q91XZ6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb4Q91XZ6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb4Q91XZ6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdhb4Q91XZ6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb4Q91XZ6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb4Q91XZ6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.8■□□□□ 0.76
Pcdhb4Q91XZ6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb4Q91XZ6 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.8■□□□□ 0.76
Pcdhb4Q91XZ6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb4Q91XZ6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb4Q91XZ6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb4Q91XZ6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb4Q91XZ6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb4Q91XZ6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb4Q91XZ6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhb4Q91XZ6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb4Q91XZ6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.78■□□□□ 0.76
Pcdhb4Q91XZ6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb4Q91XZ6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb4Q91XZ6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb4Q91XZ6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhb4Q91XZ6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb4Q91XZ6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb4Q91XZ6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.77■□□□□ 0.76
Pcdhb4Q91XZ6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb4Q91XZ6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb4Q91XZ6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdhb4Q91XZ6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb4Q91XZ6 Gm15546-201ENSMUST00000122095 826 ntBASIC19.77■□□□□ 0.76
Pcdhb4Q91XZ6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb4Q91XZ6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.77■□□□□ 0.76
Pcdhb4Q91XZ6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.77■□□□□ 0.76
Pcdhb4Q91XZ6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb4Q91XZ6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Pcdhb4Q91XZ6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.77■□□□□ 0.75
Pcdhb4Q91XZ6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb4Q91XZ6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.77■□□□□ 0.75
Pcdhb4Q91XZ6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Pcdhb4Q91XZ6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb4Q91XZ6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb4Q91XZ6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb4Q91XZ6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb4Q91XZ6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb4Q91XZ6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb4Q91XZ6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb4Q91XZ6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb4Q91XZ6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb4Q91XZ6 Gm7143-201ENSMUST00000222811 859 ntBASIC19.76■□□□□ 0.75
Pcdhb4Q91XZ6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.76■□□□□ 0.75
Pcdhb4Q91XZ6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb4Q91XZ6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb4Q91XZ6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdhb4Q91XZ6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb4Q91XZ6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb4Q91XZ6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb4Q91XZ6 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.75■□□□□ 0.75
Pcdhb4Q91XZ6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb4Q91XZ6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pcdhb4Q91XZ6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb4Q91XZ6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhb4Q91XZ6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb4Q91XZ6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb4Q91XZ6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb4Q91XZ6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhb4Q91XZ6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb4Q91XZ6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb4Q91XZ6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb4Q91XZ6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb4Q91XZ6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb4Q91XZ6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb4Q91XZ6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Pcdhb4Q91XZ6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb4Q91XZ6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.74■□□□□ 0.75
Pcdhb4Q91XZ6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb4Q91XZ6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb4Q91XZ6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhb4Q91XZ6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb4Q91XZ6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb4Q91XZ6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb4Q91XZ6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms