Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb5Q91XZ5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb5Q91XZ5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC23.74■■□□□ 1.39
Pcdhb5Q91XZ5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC23.74■■□□□ 1.39
Pcdhb5Q91XZ5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb5Q91XZ5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb5Q91XZ5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb5Q91XZ5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
Pcdhb5Q91XZ5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb5Q91XZ5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb5Q91XZ5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb5Q91XZ5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb5Q91XZ5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb5Q91XZ5 Gm42778-201ENSMUST00000199644 553 ntBASIC23.73■■□□□ 1.39
Pcdhb5Q91XZ5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb5Q91XZ5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.73■■□□□ 1.39
Pcdhb5Q91XZ5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb5Q91XZ5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb5Q91XZ5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
Pcdhb5Q91XZ5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Pcdhb5Q91XZ5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC23.72■■□□□ 1.39
Pcdhb5Q91XZ5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb5Q91XZ5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb5Q91XZ5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb5Q91XZ5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC23.71■■□□□ 1.39
Pcdhb5Q91XZ5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Pcdhb5Q91XZ5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb5Q91XZ5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb5Q91XZ5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Pcdhb5Q91XZ5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Pcdhb5Q91XZ5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Pcdhb5Q91XZ5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb5Q91XZ5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb5Q91XZ5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb5Q91XZ5 Gm10033-202ENSMUST00000211874 928 ntBASIC23.7■■□□□ 1.38
Pcdhb5Q91XZ5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb5Q91XZ5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb5Q91XZ5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb5Q91XZ5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb5Q91XZ5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb5Q91XZ5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb5Q91XZ5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Pcdhb5Q91XZ5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb5Q91XZ5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb5Q91XZ5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.69■■□□□ 1.38
Pcdhb5Q91XZ5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.69■■□□□ 1.38
Pcdhb5Q91XZ5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC23.69■■□□□ 1.38
Pcdhb5Q91XZ5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb5Q91XZ5 AV356131-201ENSMUST00000206201 750 ntBASIC23.68■■□□□ 1.38
Pcdhb5Q91XZ5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.68■■□□□ 1.38
Pcdhb5Q91XZ5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb5Q91XZ5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb5Q91XZ5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC23.68■■□□□ 1.38
Pcdhb5Q91XZ5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb5Q91XZ5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb5Q91XZ5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb5Q91XZ5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb5Q91XZ5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb5Q91XZ5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Pcdhb5Q91XZ5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC23.67■■□□□ 1.38
Pcdhb5Q91XZ5 Gm37179-201ENSMUST00000194862 823 ntBASIC23.67■■□□□ 1.38
Pcdhb5Q91XZ5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.67■■□□□ 1.38
Pcdhb5Q91XZ5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb5Q91XZ5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb5Q91XZ5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb5Q91XZ5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Pcdhb5Q91XZ5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.67■■□□□ 1.38
Pcdhb5Q91XZ5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Pcdhb5Q91XZ5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb5Q91XZ5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC23.66■■□□□ 1.38
Pcdhb5Q91XZ5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb5Q91XZ5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Pcdhb5Q91XZ5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb5Q91XZ5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Pcdhb5Q91XZ5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.65■■□□□ 1.38
Pcdhb5Q91XZ5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.65■■□□□ 1.38
Pcdhb5Q91XZ5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb5Q91XZ5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb5Q91XZ5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb5Q91XZ5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
Pcdhb5Q91XZ5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb5Q91XZ5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb5Q91XZ5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb5Q91XZ5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC23.64■■□□□ 1.37
Pcdhb5Q91XZ5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb5Q91XZ5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb5Q91XZ5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb5Q91XZ5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC23.63■■□□□ 1.37
Pcdhb5Q91XZ5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb5Q91XZ5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb5Q91XZ5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Pcdhb5Q91XZ5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb5Q91XZ5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC23.62■■□□□ 1.37
Pcdhb5Q91XZ5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.62■■□□□ 1.37
Pcdhb5Q91XZ5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb5Q91XZ5 Gm9988-201ENSMUST00000069786 435 ntBASIC23.62■■□□□ 1.37
Pcdhb5Q91XZ5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb5Q91XZ5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb5Q91XZ5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb5Q91XZ5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms