Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb6Q91XZ4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdhb6Q91XZ4 Gm12922-201ENSMUST00000120626 809 ntBASIC20.63■□□□□ 0.89
Pcdhb6Q91XZ4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Pcdhb6Q91XZ4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdhb6Q91XZ4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb6Q91XZ4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb6Q91XZ4 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.62■□□□□ 0.89
Pcdhb6Q91XZ4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdhb6Q91XZ4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb6Q91XZ4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb6Q91XZ4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb6Q91XZ4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb6Q91XZ4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb6Q91XZ4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhb6Q91XZ4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb6Q91XZ4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb6Q91XZ4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb6Q91XZ4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb6Q91XZ4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Pcdhb6Q91XZ4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb6Q91XZ4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb6Q91XZ4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb6Q91XZ4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb6Q91XZ4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdhb6Q91XZ4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb6Q91XZ4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb6Q91XZ4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb6Q91XZ4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb6Q91XZ4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb6Q91XZ4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdhb6Q91XZ4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdhb6Q91XZ4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb6Q91XZ4 Golgb1-201ENSMUST00000023534 498 ntBASIC20.6■□□□□ 0.89
Pcdhb6Q91XZ4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb6Q91XZ4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb6Q91XZ4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb6Q91XZ4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb6Q91XZ4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb6Q91XZ4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb6Q91XZ4 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.59■□□□□ 0.89
Pcdhb6Q91XZ4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.59■□□□□ 0.89
Pcdhb6Q91XZ4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhb6Q91XZ4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb6Q91XZ4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pcdhb6Q91XZ4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb6Q91XZ4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdhb6Q91XZ4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb6Q91XZ4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb6Q91XZ4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb6Q91XZ4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhb6Q91XZ4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb6Q91XZ4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb6Q91XZ4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.58■□□□□ 0.89
Pcdhb6Q91XZ4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb6Q91XZ4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb6Q91XZ4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb6Q91XZ4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb6Q91XZ4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb6Q91XZ4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb6Q91XZ4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb6Q91XZ4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Pcdhb6Q91XZ4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhb6Q91XZ4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhb6Q91XZ4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb6Q91XZ4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb6Q91XZ4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb6Q91XZ4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb6Q91XZ4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb6Q91XZ4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.57■□□□□ 0.88
Pcdhb6Q91XZ4 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.57■□□□□ 0.88
Pcdhb6Q91XZ4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.57■□□□□ 0.88
Pcdhb6Q91XZ4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb6Q91XZ4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb6Q91XZ4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb6Q91XZ4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb6Q91XZ4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb6Q91XZ4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb6Q91XZ4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb6Q91XZ4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb6Q91XZ4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb6Q91XZ4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb6Q91XZ4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb6Q91XZ4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.56■□□□□ 0.88
Pcdhb6Q91XZ4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb6Q91XZ4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdhb6Q91XZ4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb6Q91XZ4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb6Q91XZ4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhb6Q91XZ4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pcdhb6Q91XZ4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhb6Q91XZ4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb6Q91XZ4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb6Q91XZ4 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.54■□□□□ 0.88
Pcdhb6Q91XZ4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb6Q91XZ4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb6Q91XZ4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb6Q91XZ4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb6Q91XZ4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pcdhb6Q91XZ4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms