Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
StrcQ8VIM6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
StrcQ8VIM6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
StrcQ8VIM6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
StrcQ8VIM6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
StrcQ8VIM6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
StrcQ8VIM6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
StrcQ8VIM6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
StrcQ8VIM6 Gm20760-201ENSMUST00000179197 648 ntBASIC24.57■■□□□ 1.52
StrcQ8VIM6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC24.57■■□□□ 1.52
StrcQ8VIM6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
StrcQ8VIM6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
StrcQ8VIM6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
StrcQ8VIM6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC24.56■■□□□ 1.52
StrcQ8VIM6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
StrcQ8VIM6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
StrcQ8VIM6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
StrcQ8VIM6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
StrcQ8VIM6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24.55■■□□□ 1.52
StrcQ8VIM6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC24.55■■□□□ 1.52
StrcQ8VIM6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
StrcQ8VIM6 CT030146.1-201ENSMUST00000220919 217 ntBASIC24.55■■□□□ 1.52
StrcQ8VIM6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
StrcQ8VIM6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
StrcQ8VIM6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
StrcQ8VIM6 Mir7071-201ENSMUST00000184847 69 ntBASIC24.54■■□□□ 1.52
StrcQ8VIM6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
StrcQ8VIM6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
StrcQ8VIM6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
StrcQ8VIM6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
StrcQ8VIM6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC24.53■■□□□ 1.52
StrcQ8VIM6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
StrcQ8VIM6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
StrcQ8VIM6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
StrcQ8VIM6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
StrcQ8VIM6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
StrcQ8VIM6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC24.52■■□□□ 1.52
StrcQ8VIM6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
StrcQ8VIM6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC24.52■■□□□ 1.52
StrcQ8VIM6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
StrcQ8VIM6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC24.52■■□□□ 1.52
StrcQ8VIM6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
StrcQ8VIM6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
StrcQ8VIM6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC24.51■■□□□ 1.51
StrcQ8VIM6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
StrcQ8VIM6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
StrcQ8VIM6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
StrcQ8VIM6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
StrcQ8VIM6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
StrcQ8VIM6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
StrcQ8VIM6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
StrcQ8VIM6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
StrcQ8VIM6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.5■■□□□ 1.51
StrcQ8VIM6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
StrcQ8VIM6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
StrcQ8VIM6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
StrcQ8VIM6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
StrcQ8VIM6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.49■■□□□ 1.51
StrcQ8VIM6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
StrcQ8VIM6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
StrcQ8VIM6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
StrcQ8VIM6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
StrcQ8VIM6 Gm10571-201ENSMUST00000097869 1638 ntBASIC24.48■■□□□ 1.51
StrcQ8VIM6 Gm13146-201ENSMUST00000118508 780 ntBASIC24.48■■□□□ 1.51
StrcQ8VIM6 CT010467.1-202ENSMUST00000205406 714 ntBASIC24.48■■□□□ 1.51
StrcQ8VIM6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
StrcQ8VIM6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
StrcQ8VIM6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
StrcQ8VIM6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
StrcQ8VIM6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
StrcQ8VIM6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
StrcQ8VIM6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
StrcQ8VIM6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC24.47■■□□□ 1.51
StrcQ8VIM6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC24.47■■□□□ 1.51
StrcQ8VIM6 Gm22240-201ENSMUST00000175225 82 ntBASIC24.47■■□□□ 1.51
StrcQ8VIM6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
StrcQ8VIM6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
StrcQ8VIM6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC24.46■■□□□ 1.51
StrcQ8VIM6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC24.46■■□□□ 1.51
StrcQ8VIM6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
StrcQ8VIM6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC24.46■■□□□ 1.51
StrcQ8VIM6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
StrcQ8VIM6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
StrcQ8VIM6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
StrcQ8VIM6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
StrcQ8VIM6 Mir6236-201ENSMUST00000184437 123 ntBASIC24.45■■□□□ 1.5
StrcQ8VIM6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
StrcQ8VIM6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
StrcQ8VIM6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
StrcQ8VIM6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
StrcQ8VIM6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
StrcQ8VIM6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
StrcQ8VIM6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
StrcQ8VIM6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC24.44■■□□□ 1.5
StrcQ8VIM6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
StrcQ8VIM6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
StrcQ8VIM6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
StrcQ8VIM6 Gm26524-201ENSMUST00000192339 390 ntBASIC24.43■■□□□ 1.5
StrcQ8VIM6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
StrcQ8VIM6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms