Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4aQ8VEJ9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4aQ8VEJ9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4aQ8VEJ9 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.3■□□□□ 0.68
Vps4aQ8VEJ9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.3■□□□□ 0.68
Vps4aQ8VEJ9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4aQ8VEJ9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4aQ8VEJ9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps4aQ8VEJ9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Vps4aQ8VEJ9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4aQ8VEJ9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4aQ8VEJ9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4aQ8VEJ9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4aQ8VEJ9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4aQ8VEJ9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4aQ8VEJ9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4aQ8VEJ9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4aQ8VEJ9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.29■□□□□ 0.68
Vps4aQ8VEJ9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4aQ8VEJ9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Vps4aQ8VEJ9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Vps4aQ8VEJ9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4aQ8VEJ9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps4aQ8VEJ9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps4aQ8VEJ9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps4aQ8VEJ9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps4aQ8VEJ9 Gm45417-201ENSMUST00000209533 758 ntBASIC19.28■□□□□ 0.68
Vps4aQ8VEJ9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Vps4aQ8VEJ9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps4aQ8VEJ9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps4aQ8VEJ9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Vps4aQ8VEJ9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vps4aQ8VEJ9 Gm10399-202ENSMUST00000202768 748 ntBASIC19.27■□□□□ 0.68
Vps4aQ8VEJ9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.27■□□□□ 0.68
Vps4aQ8VEJ9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps4aQ8VEJ9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps4aQ8VEJ9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps4aQ8VEJ9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Vps4aQ8VEJ9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vps4aQ8VEJ9 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.26■□□□□ 0.67
Vps4aQ8VEJ9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vps4aQ8VEJ9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps4aQ8VEJ9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps4aQ8VEJ9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps4aQ8VEJ9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Vps4aQ8VEJ9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Vps4aQ8VEJ9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps4aQ8VEJ9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vps4aQ8VEJ9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps4aQ8VEJ9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Vps4aQ8VEJ9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4aQ8VEJ9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.25■□□□□ 0.67
Vps4aQ8VEJ9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4aQ8VEJ9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4aQ8VEJ9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Vps4aQ8VEJ9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4aQ8VEJ9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.25■□□□□ 0.67
Vps4aQ8VEJ9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4aQ8VEJ9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4aQ8VEJ9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Vps4aQ8VEJ9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4aQ8VEJ9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps4aQ8VEJ9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Vps4aQ8VEJ9 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.25■□□□□ 0.67
Vps4aQ8VEJ9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4aQ8VEJ9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4aQ8VEJ9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.24■□□□□ 0.67
Vps4aQ8VEJ9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Vps4aQ8VEJ9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4aQ8VEJ9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4aQ8VEJ9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4aQ8VEJ9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4aQ8VEJ9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4aQ8VEJ9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4aQ8VEJ9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps4aQ8VEJ9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Vps4aQ8VEJ9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4aQ8VEJ9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4aQ8VEJ9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Vps4aQ8VEJ9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4aQ8VEJ9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.23■□□□□ 0.67
Vps4aQ8VEJ9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.23■□□□□ 0.67
Vps4aQ8VEJ9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4aQ8VEJ9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4aQ8VEJ9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps4aQ8VEJ9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4aQ8VEJ9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4aQ8VEJ9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4aQ8VEJ9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4aQ8VEJ9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Vps4aQ8VEJ9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4aQ8VEJ9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4aQ8VEJ9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Vps4aQ8VEJ9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.22■□□□□ 0.67
Vps4aQ8VEJ9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.22■□□□□ 0.67
Vps4aQ8VEJ9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4aQ8VEJ9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4aQ8VEJ9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Vps4aQ8VEJ9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps4aQ8VEJ9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms