Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rprd1aQ8VDS4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rprd1aQ8VDS4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rprd1aQ8VDS4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rprd1aQ8VDS4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.57■□□□□ 0.88
Rprd1aQ8VDS4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rprd1aQ8VDS4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rprd1aQ8VDS4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rprd1aQ8VDS4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rprd1aQ8VDS4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rprd1aQ8VDS4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rprd1aQ8VDS4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rprd1aQ8VDS4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rprd1aQ8VDS4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rprd1aQ8VDS4 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.56■□□□□ 0.88
Rprd1aQ8VDS4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rprd1aQ8VDS4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rprd1aQ8VDS4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rprd1aQ8VDS4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rprd1aQ8VDS4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rprd1aQ8VDS4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rprd1aQ8VDS4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rprd1aQ8VDS4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rprd1aQ8VDS4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rprd1aQ8VDS4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rprd1aQ8VDS4 Mir6236-201ENSMUST00000184437 123 ntBASIC20.55■□□□□ 0.88
Rprd1aQ8VDS4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rprd1aQ8VDS4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rprd1aQ8VDS4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rprd1aQ8VDS4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rprd1aQ8VDS4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.55■□□□□ 0.88
Rprd1aQ8VDS4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rprd1aQ8VDS4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rprd1aQ8VDS4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
Rprd1aQ8VDS4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.54■□□□□ 0.88
Rprd1aQ8VDS4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
Rprd1aQ8VDS4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rprd1aQ8VDS4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rprd1aQ8VDS4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.54■□□□□ 0.88
Rprd1aQ8VDS4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rprd1aQ8VDS4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rprd1aQ8VDS4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rprd1aQ8VDS4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rprd1aQ8VDS4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rprd1aQ8VDS4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.53■□□□□ 0.88
Rprd1aQ8VDS4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rprd1aQ8VDS4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rprd1aQ8VDS4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rprd1aQ8VDS4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rprd1aQ8VDS4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rprd1aQ8VDS4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Rprd1aQ8VDS4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Rprd1aQ8VDS4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.52■□□□□ 0.88
Rprd1aQ8VDS4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rprd1aQ8VDS4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rprd1aQ8VDS4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rprd1aQ8VDS4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rprd1aQ8VDS4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rprd1aQ8VDS4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rprd1aQ8VDS4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rprd1aQ8VDS4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rprd1aQ8VDS4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rprd1aQ8VDS4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rprd1aQ8VDS4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Rprd1aQ8VDS4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.51■□□□□ 0.87
Rprd1aQ8VDS4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rprd1aQ8VDS4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rprd1aQ8VDS4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rprd1aQ8VDS4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rprd1aQ8VDS4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rprd1aQ8VDS4 Mir7075-201ENSMUST00000184187 82 ntBASIC20.5■□□□□ 0.87
Rprd1aQ8VDS4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rprd1aQ8VDS4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rprd1aQ8VDS4 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.5■□□□□ 0.87
Rprd1aQ8VDS4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rprd1aQ8VDS4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rprd1aQ8VDS4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rprd1aQ8VDS4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rprd1aQ8VDS4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rprd1aQ8VDS4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rprd1aQ8VDS4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rprd1aQ8VDS4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rprd1aQ8VDS4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rprd1aQ8VDS4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rprd1aQ8VDS4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rprd1aQ8VDS4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rprd1aQ8VDS4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rprd1aQ8VDS4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rprd1aQ8VDS4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rprd1aQ8VDS4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rprd1aQ8VDS4 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.48■□□□□ 0.87
Rprd1aQ8VDS4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rprd1aQ8VDS4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rprd1aQ8VDS4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Rprd1aQ8VDS4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rprd1aQ8VDS4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rprd1aQ8VDS4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rprd1aQ8VDS4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rprd1aQ8VDS4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Rprd1aQ8VDS4 Gm15039-201ENSMUST00000118914 875 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms