Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rnf8Q8VC56 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.18■□□□□ 0.66
Rnf8Q8VC56 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf8Q8VC56 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf8Q8VC56 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf8Q8VC56 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf8Q8VC56 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf8Q8VC56 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf8Q8VC56 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf8Q8VC56 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf8Q8VC56 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf8Q8VC56 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rnf8Q8VC56 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf8Q8VC56 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.17■□□□□ 0.66
Rnf8Q8VC56 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf8Q8VC56 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.17■□□□□ 0.66
Rnf8Q8VC56 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf8Q8VC56 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf8Q8VC56 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf8Q8VC56 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rnf8Q8VC56 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf8Q8VC56 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf8Q8VC56 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.14■□□□□ 0.65
Rnf8Q8VC56 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.14■□□□□ 0.65
Rnf8Q8VC56 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.14■□□□□ 0.65
Rnf8Q8VC56 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rnf8Q8VC56 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rnf8Q8VC56 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf8Q8VC56 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.14■□□□□ 0.65
Rnf8Q8VC56 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf8Q8VC56 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf8Q8VC56 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf8Q8VC56 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf8Q8VC56 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf8Q8VC56 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf8Q8VC56 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rnf8Q8VC56 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rnf8Q8VC56 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf8Q8VC56 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf8Q8VC56 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf8Q8VC56 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf8Q8VC56 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf8Q8VC56 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf8Q8VC56 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf8Q8VC56 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf8Q8VC56 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf8Q8VC56 Golph3-202ENSMUST00000226517 2359 ntBASIC19.12■□□□□ 0.65
Rnf8Q8VC56 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf8Q8VC56 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf8Q8VC56 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf8Q8VC56 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf8Q8VC56 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf8Q8VC56 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rnf8Q8VC56 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf8Q8VC56 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf8Q8VC56 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf8Q8VC56 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf8Q8VC56 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rnf8Q8VC56 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Rnf8Q8VC56 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf8Q8VC56 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf8Q8VC56 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf8Q8VC56 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf8Q8VC56 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf8Q8VC56 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.11■□□□□ 0.65
Rnf8Q8VC56 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf8Q8VC56 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms