Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd2Q8R3K3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd2Q8R3K3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ptcd2Q8R3K3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd2Q8R3K3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd2Q8R3K3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd2Q8R3K3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd2Q8R3K3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd2Q8R3K3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.37■■□□□ 1.01
Ptcd2Q8R3K3 Gm11643-201ENSMUST00000119578 864 ntBASIC21.37■■□□□ 1.01
Ptcd2Q8R3K3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd2Q8R3K3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd2Q8R3K3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd2Q8R3K3 Gm6365-201ENSMUST00000054711 744 ntBASIC21.37■■□□□ 1.01
Ptcd2Q8R3K3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ptcd2Q8R3K3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd2Q8R3K3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptcd2Q8R3K3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ptcd2Q8R3K3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptcd2Q8R3K3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptcd2Q8R3K3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptcd2Q8R3K3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.35■■□□□ 1.01
Ptcd2Q8R3K3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptcd2Q8R3K3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptcd2Q8R3K3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Ptcd2Q8R3K3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.35■■□□□ 1.01
Ptcd2Q8R3K3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.35■■□□□ 1.01
Ptcd2Q8R3K3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ptcd2Q8R3K3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptcd2Q8R3K3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.34■■□□□ 1.01
Ptcd2Q8R3K3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptcd2Q8R3K3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.34■■□□□ 1.01
Ptcd2Q8R3K3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.34■■□□□ 1.01
Ptcd2Q8R3K3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ptcd2Q8R3K3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptcd2Q8R3K3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ptcd2Q8R3K3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptcd2Q8R3K3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptcd2Q8R3K3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptcd2Q8R3K3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptcd2Q8R3K3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptcd2Q8R3K3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.32■■□□□ 1
Ptcd2Q8R3K3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptcd2Q8R3K3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptcd2Q8R3K3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptcd2Q8R3K3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ptcd2Q8R3K3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ptcd2Q8R3K3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ptcd2Q8R3K3 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.31■■□□□ 1
Ptcd2Q8R3K3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptcd2Q8R3K3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptcd2Q8R3K3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptcd2Q8R3K3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptcd2Q8R3K3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptcd2Q8R3K3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ptcd2Q8R3K3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ptcd2Q8R3K3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ptcd2Q8R3K3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ptcd2Q8R3K3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Ptcd2Q8R3K3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ptcd2Q8R3K3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ptcd2Q8R3K3 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.3■■□□□ 1
Ptcd2Q8R3K3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ptcd2Q8R3K3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ptcd2Q8R3K3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ptcd2Q8R3K3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ptcd2Q8R3K3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ptcd2Q8R3K3 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.29■■□□□ 1
Ptcd2Q8R3K3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ptcd2Q8R3K3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.29■■□□□ 1
Ptcd2Q8R3K3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ptcd2Q8R3K3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptcd2Q8R3K3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptcd2Q8R3K3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptcd2Q8R3K3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ptcd2Q8R3K3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.28■■□□□ 1
Ptcd2Q8R3K3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptcd2Q8R3K3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptcd2Q8R3K3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.28■■□□□ 1
Ptcd2Q8R3K3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptcd2Q8R3K3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ptcd2Q8R3K3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptcd2Q8R3K3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
Ptcd2Q8R3K3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.27■■□□□ 1
Ptcd2Q8R3K3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ptcd2Q8R3K3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.27■■□□□ 1
Ptcd2Q8R3K3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ptcd2Q8R3K3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ptcd2Q8R3K3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ptcd2Q8R3K3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ptcd2Q8R3K3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptcd2Q8R3K3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptcd2Q8R3K3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ptcd2Q8R3K3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.26■□□□□ 0.99
Ptcd2Q8R3K3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ptcd2Q8R3K3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ptcd2Q8R3K3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ptcd2Q8R3K3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ptcd2Q8R3K3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ptcd2Q8R3K3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms