Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nudcd3Q8R1N4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Nudcd3Q8R1N4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nudcd3Q8R1N4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nudcd3Q8R1N4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nudcd3Q8R1N4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nudcd3Q8R1N4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Nudcd3Q8R1N4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nudcd3Q8R1N4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Nudcd3Q8R1N4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nudcd3Q8R1N4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nudcd3Q8R1N4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nudcd3Q8R1N4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.97■□□□□ 0.79
Nudcd3Q8R1N4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.96■□□□□ 0.79
Nudcd3Q8R1N4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nudcd3Q8R1N4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nudcd3Q8R1N4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nudcd3Q8R1N4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nudcd3Q8R1N4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nudcd3Q8R1N4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nudcd3Q8R1N4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nudcd3Q8R1N4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Nudcd3Q8R1N4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nudcd3Q8R1N4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nudcd3Q8R1N4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nudcd3Q8R1N4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nudcd3Q8R1N4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nudcd3Q8R1N4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Nudcd3Q8R1N4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Nudcd3Q8R1N4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nudcd3Q8R1N4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nudcd3Q8R1N4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nudcd3Q8R1N4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nudcd3Q8R1N4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nudcd3Q8R1N4 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.95■□□□□ 0.78
Nudcd3Q8R1N4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.95■□□□□ 0.78
Nudcd3Q8R1N4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Nudcd3Q8R1N4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Nudcd3Q8R1N4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nudcd3Q8R1N4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nudcd3Q8R1N4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nudcd3Q8R1N4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.94■□□□□ 0.78
Nudcd3Q8R1N4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nudcd3Q8R1N4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nudcd3Q8R1N4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nudcd3Q8R1N4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nudcd3Q8R1N4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.93■□□□□ 0.78
Nudcd3Q8R1N4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nudcd3Q8R1N4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Nudcd3Q8R1N4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.93■□□□□ 0.78
Nudcd3Q8R1N4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nudcd3Q8R1N4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nudcd3Q8R1N4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nudcd3Q8R1N4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nudcd3Q8R1N4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nudcd3Q8R1N4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nudcd3Q8R1N4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nudcd3Q8R1N4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Nudcd3Q8R1N4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Nudcd3Q8R1N4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nudcd3Q8R1N4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nudcd3Q8R1N4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.92■□□□□ 0.78
Nudcd3Q8R1N4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nudcd3Q8R1N4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nudcd3Q8R1N4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nudcd3Q8R1N4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.92■□□□□ 0.78
Nudcd3Q8R1N4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Nudcd3Q8R1N4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nudcd3Q8R1N4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nudcd3Q8R1N4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nudcd3Q8R1N4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nudcd3Q8R1N4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.91■□□□□ 0.78
Nudcd3Q8R1N4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.91■□□□□ 0.78
Nudcd3Q8R1N4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.91■□□□□ 0.78
Nudcd3Q8R1N4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nudcd3Q8R1N4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nudcd3Q8R1N4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nudcd3Q8R1N4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nudcd3Q8R1N4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nudcd3Q8R1N4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nudcd3Q8R1N4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nudcd3Q8R1N4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nudcd3Q8R1N4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nudcd3Q8R1N4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nudcd3Q8R1N4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nudcd3Q8R1N4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nudcd3Q8R1N4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.9■□□□□ 0.78
Nudcd3Q8R1N4 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.9■□□□□ 0.78
Nudcd3Q8R1N4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.9■□□□□ 0.78
Nudcd3Q8R1N4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nudcd3Q8R1N4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nudcd3Q8R1N4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nudcd3Q8R1N4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Nudcd3Q8R1N4 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.89■□□□□ 0.77
Nudcd3Q8R1N4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nudcd3Q8R1N4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.89■□□□□ 0.77
Nudcd3Q8R1N4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nudcd3Q8R1N4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.88■□□□□ 0.77
Nudcd3Q8R1N4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nudcd3Q8R1N4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms