Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.71■■□□□ 1.39
Atf7Q8R0S1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Atf7Q8R0S1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
Atf7Q8R0S1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Atf7Q8R0S1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Atf7Q8R0S1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Atf7Q8R0S1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Atf7Q8R0S1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Atf7Q8R0S1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Atf7Q8R0S1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Atf7Q8R0S1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Atf7Q8R0S1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Atf7Q8R0S1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
Atf7Q8R0S1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Atf7Q8R0S1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Atf7Q8R0S1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Atf7Q8R0S1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Atf7Q8R0S1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Atf7Q8R0S1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.69■■□□□ 1.38
Atf7Q8R0S1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Atf7Q8R0S1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Atf7Q8R0S1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Atf7Q8R0S1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Atf7Q8R0S1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Atf7Q8R0S1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Atf7Q8R0S1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Atf7Q8R0S1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Atf7Q8R0S1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.68■■□□□ 1.38
Atf7Q8R0S1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC23.68■■□□□ 1.38
Atf7Q8R0S1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.68■■□□□ 1.38
Atf7Q8R0S1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.68■■□□□ 1.38
Atf7Q8R0S1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Atf7Q8R0S1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Atf7Q8R0S1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Atf7Q8R0S1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Atf7Q8R0S1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Atf7Q8R0S1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Atf7Q8R0S1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.67■■□□□ 1.38
Atf7Q8R0S1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Atf7Q8R0S1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Atf7Q8R0S1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Atf7Q8R0S1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Atf7Q8R0S1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Atf7Q8R0S1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Atf7Q8R0S1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Atf7Q8R0S1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Atf7Q8R0S1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Atf7Q8R0S1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Atf7Q8R0S1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Atf7Q8R0S1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Atf7Q8R0S1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Atf7Q8R0S1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Atf7Q8R0S1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Atf7Q8R0S1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Atf7Q8R0S1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Atf7Q8R0S1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Atf7Q8R0S1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Atf7Q8R0S1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Atf7Q8R0S1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.38
Atf7Q8R0S1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Atf7Q8R0S1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Atf7Q8R0S1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Atf7Q8R0S1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Atf7Q8R0S1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Atf7Q8R0S1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Atf7Q8R0S1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.64■■□□□ 1.37
Atf7Q8R0S1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Atf7Q8R0S1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Atf7Q8R0S1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Atf7Q8R0S1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Atf7Q8R0S1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Atf7Q8R0S1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.63■■□□□ 1.37
Atf7Q8R0S1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Atf7Q8R0S1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Atf7Q8R0S1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Atf7Q8R0S1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Atf7Q8R0S1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Atf7Q8R0S1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Atf7Q8R0S1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Atf7Q8R0S1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Atf7Q8R0S1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Atf7Q8R0S1 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.62■■□□□ 1.37
Atf7Q8R0S1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Atf7Q8R0S1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Atf7Q8R0S1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Atf7Q8R0S1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Atf7Q8R0S1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Atf7Q8R0S1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Atf7Q8R0S1 Gm43909-201ENSMUST00000203443 1876 ntBASIC23.62■■□□□ 1.37
Atf7Q8R0S1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Atf7Q8R0S1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Atf7Q8R0S1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Atf7Q8R0S1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Atf7Q8R0S1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Atf7Q8R0S1 Gm12922-201ENSMUST00000120626 809 ntBASIC23.61■■□□□ 1.37
Atf7Q8R0S1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.61■■□□□ 1.37
Atf7Q8R0S1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Atf7Q8R0S1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Atf7Q8R0S1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Atf7Q8R0S1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms